Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03243 ATGGCCGATCTTAAGGTTATCAGACTGATGCCTAAACCAACAGCAGTGGCTTTGTCGTATGTGGTTCGCCAACTGACTTCTTCTGCTTCTGACAATGGAAGCATGAAAATTGCTCTCATTTTCAATATGGATGTCGGTTATTGTGATGTTTCTGTTATTGAAGCAGAAAAAGGAAAATTCCGAATAAAAGCCTCGACAGGAAGTTCTATTGGTGGAGAAGATTTGCTTGTAAATATGATGTGTCATCttttacctgattttgaagagATATTCAAGAGACATGTTCATTGGAACTCAGAAATTTTATTAATGGCTTTTCTTCGAAGTAGAATCCATGACGTGATTACTAAGCTTTTGTCTGAGACAAGTGTTGGGGATATGGTTTGA 387 0.3618 MADLKVIRLMPKPTAVALSYVVRQLTSSASDNGSMKIALIFNMDVGYCDVSVIEAEKGKFRIKASTGSSIGGEDLLVNMMCHLLPDFEEIFKRHVHWNSEILLMAFLRSRIHDVITKLLSETSVGDMV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03243 128 Gene3D Actin; Chain A, domain 4 72 121 - -
Tsu03g03243 128 Gene3D - 30 71 - -
Tsu03g03243 128 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 1 124 - -
Tsu03g03243 128 Gene3D - 1 24 - -
Tsu03g03243 128 PANTHER HEAT SHOCK PROTEIN 70KDA 1 124 IPR013126 GO:0005524|GO:0140662
Tsu03g03243 128 Pfam Hsp70 protein 2 109 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03243 Tsu-Chr3 44787998 44788384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03243 1 102 Calmodulin-binding Proteins AT5G02500 33.010 1.48e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03243 K09489 - csin:114283756 114.39