Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03241 ATGGCCTTCACTTGCATCTCCTCTTCCCTTTTCACTCCTCTTCAACTCCACCACCATCCACCACATTTCTCTGCCGCCACTTTTCACCCTTTTCCCTCGATTCAACTAACCCCTTCTCACCCTTTTCGCCTTTCGGCTCTTCCCCTCTTCACAGGCAACAACAATGGTGGTCAGTGGCGGAGCCACCTACATGTCGGGGGCAATAACCCTTTCGGATCAGATGATGATTCCTCGTCATCTTCTTCAGCATCTTGTAGTGAAAACACCAAGGAAGAAAGCTCGTCGCTGCCTCCTGAAACAACAATCGGAATTGACATTGGTACTTGGCCATGTTGTATTTCTGTGTGGAATGGTTCTGAAGTGGAGctttggaaaaagaaaataaatgagatGATGAAGATATCTTTCGAAACTTCCAAAGATCATGACTATTCTATTGGAGCTAGTAGTACTGAAGTCTCACTCTCACTAGAAAATGAGATTACAATTTTATACATGAAAGACTTATGTAGCATAATTTTCGATGAAAATGCAAGTTTCCCATTTCTGATGCACACCGAGGACATTAAGGTTCGCCCTTTTGTTGCTTCATTTGTGAACAAACTGTGGAAATCAACTACTGCTGTAGAACTACTTGGAAAATTTATGATAGAACTAAGATCAATGGTTGAAACTCAGCTGAACAGACCTATAAGAAATGTCGTGTTTACAGTTCCAGTTTCATTCACTCAATTGCAGCTAACCATGATACATTCTGCTTGTGCGATGGCCGGTCTTAAAGTGATCAGAATGATACCTAAACCAACAGCAGTGGCTTTGTCATATGTGGTTCGTCAACTGACTTCTTCTGCTTCTATCAAAGGAAGCATGAAAATTGCTCTCATTTTCAATATGGATGCAGGATATTGTGATGTTTCTGTTATTGAAGCAGAAAAAGGAAAATTCCGAATAAAAGCATCGACAGGAAGTTCTATTGGTGGAGAAGATTTGCTTGGAAATATGATGTGTCATCttttacctgattttgaagagATATTCAAGAGACATGTTCATTGGAACTCTGATATTATATTGATGGCTTTTCTTCGAAGTAGAATCCATGACGTGATTACTAAGCTTTCGTCTGAGACAAGTGTCGAGGTTGACTTAGATTTGGGATATGGTTTGAAGATATGCAAGGTTGTAACGCGGACAGAGTTTGAGGAAGTTAACAAAGAGGTGTTTGGGAAGTGTGAAAAGTTAATCATCCAATGCTTGCAAGATGCAAAGATAGAAGTTGAGAATATAAATGATGTGATAATTGTTGGTGGATGTTGTAATATACCAAAGGTGAAGAATCTTGTTACAGAAATATGCAATGGAAAGGAAATTTATGAAGGTATAGATCCTTTGAATGCTGTACTTTGTGGTGCCGCAGTGGCAGAAGCTGTTGATGATGCCATTGGTAAAGTCATGATATCCAAAATATAG 1470 0.3878 MAFTCISSSLFTPLQLHHHPPHFSAATFHPFPSIQLTPSHPFRLSALPLFTGNNNGGQWRSHLHVGGNNPFGSDDDSSSSSSASCSENTKEESSSLPPETTIGIDIGTWPCCISVWNGSEVELWKKKINEMMKISFETSKDHDYSIGASSTEVSLSLENEITILYMKDLCSIIFDENASFPFLMHTEDIKVRPFVASFVNKLWKSTTAVELLGKFMIELRSMVETQLNRPIRNVVFTVPVSFTQLQLTMIHSACAMAGLKVIRMIPKPTAVALSYVVRQLTSSASIKGSMKIALIFNMDAGYCDVSVIEAEKGKFRIKASTGSSIGGEDLLGNMMCHLLPDFEEIFKRHVHWNSDIILMAFLRSRIHDVITKLSSETSVEVDLDLGYGLKICKVVTRTEFEEVNKEVFGKCEKLIIQCLQDAKIEVENINDVIIVGGCCNIPKVKNLVTEICNGKEIYEGIDPLNAVLCGAAVAEAVDDAIGKVMISKI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03241 489 Gene3D - 164 214 - -
Tsu03g03241 489 PANTHER HEAT SHOCK PROTEIN 70KDA 92 477 IPR013126 GO:0005524|GO:0140662
Tsu03g03241 489 SUPERFAMILY Actin-like ATPase domain 100 277 IPR043129 -
Tsu03g03241 489 MobiDBLite consensus disorder prediction 71 101 - -
Tsu03g03241 489 SUPERFAMILY Actin-like ATPase domain 292 474 IPR043129 -
Tsu03g03241 489 PRINTS 70kDa heat shock protein signature 100 113 - -
Tsu03g03241 489 PRINTS 70kDa heat shock protein signature 461 481 - -
Tsu03g03241 489 PRINTS 70kDa heat shock protein signature 301 311 - -
Tsu03g03241 489 PRINTS 70kDa heat shock protein signature 234 254 - -
Tsu03g03241 489 PRINTS 70kDa heat shock protein signature 429 445 - -
Tsu03g03241 489 Pfam Hsp70 protein 102 477 IPR013126 GO:0005524|GO:0140662
Tsu03g03241 489 Gene3D - 102 473 - -
Tsu03g03241 489 Gene3D Actin; Chain A, domain 4 327 410 - -
Tsu03g03241 489 MobiDBLite consensus disorder prediction 61 101 - -
Tsu03g03241 489 CDD HSP70_NBD 102 470 - -
Tsu03g03241 489 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 92 477 - -
Tsu03g03241 489 Gene3D - 280 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03241 Tsu-Chr3 44776343 44777916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03241 102 477 Calmodulin-binding Proteins AT1G56410 34.197 9.43e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03241 K09489 - gmx:100809773 395.971