Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03230 ATGTTACCTCTAACATTAGCTATTCCTTCCATACTCTTTCTAAtattcattttgattatgtttcatccaaaacatcatcaacaacataataaaaaatatccaCCTGGTCCTAAACCTTTGCCAATTATTGGCAACCTCCACATCCTAGGAAAACTCCCACATCGTACCCTTCAATCGCTTGCTAAAACACATGGATCAATCATGTCCTTAAAACTAGGAAAAATTCCAACCATTGTAGTTTCATCCCCCAAATCAGCTGAACAATTCCTCAAAACCCATGACAATATTTTCGCTAGTAGACCAAAACTTCAAGTCTCCGAACACATGTTTTACGGCGGAAAAGGATTGGGTTTAGCTCCATATGGTGCCTATTGGCGCAATATGAAGAAACTTTGTACTTTGCATCTTTTGAGTAGCTCGAAAGTTGAGATGTTTGCATCTTTAAGAAGCGAGGAAGTGAGGATGTTGTTGAAGTCTATTGACAAAGCTGCGACTTTAGGTGAAGTTGTGAATCTTAGTGAAATAACCGGTGAGGTTATAGCGAATATTACTTATAAGATGGTTTTGGGATATAATAAGGATAGTGATTTGGATTTAAAAGGACTTATTCGCGACGCAATGAATTTGGCTGGAACTTTTAATTTGGCTGATTTTTTGCCTTGGCTAAGCATATTTGATCTTCAGGGACTAACAAGTCGAATGAAGAAAACTAGTAAGACATTTGACCAAATAGCGGAGAAGATAATAAAAGATCATGAGAATGACATGAAAAAAGACCCTCACCAAAAGGATTTTATAGACATATTACTTTCATTAATGCATCAATCAATGGATCCTAATGATGAAGAACAGAAACATGTTATTGATAGAACTAATATCAAAGCTATTATATTAGATATGATTGGTGGAGCATTAGACTCATCTTCAGCAACAATTGAATGGACCATGTCGGAACTTTTGAGGCATCCAAATGTGATGAAGAAACTTCAAAATGAGCTAGAAAATGTGGTGGGTGTGAATAGCAACGTGAAAGAAAATGACTTTGAAAATTTACCTTATCTTAATATGGTGATAAAGGAGACATTAAGATTATATCCCGCTGGACCATTGCTAGGACCTCGTGAGTGTTTACAAGATGTTACAATTGATGGTTATAACATAAAGAAAAATTCTAGGATAATAATTAATGCTTGGGCATTAGGAAGAGATCCTAATGTTTGGACGAATAACTGTGATATGTTTTATCCTGAGAGATTTGTGAATAGTAATGTTGATCTTCGAGGACATGATTTTGAACTTATACCATTTGGATCGGGTCGTAGAGGGTGTCCTGGAATTCAATTGGCCCTAAATATGGTTAGGCTTGTTGTGGCTCAATTGGTACATTGTTTTGATTGGGAACTCCCGTTTGGTATGTCTCCTAATGACTTGGATATGACTGAGAAATTTGGACTCTCAATGCCAAGATATAACGACTTGCTAGCGGTGCCAACGACTCGAGGACAAAAGTTTGATATATAG 1521 0.3557 MLPLTLAIPSILFLIFILIMFHPKHHQQHNKKYPPGPKPLPIIGNLHILGKLPHRTLQSLAKTHGSIMSLKLGKIPTIVVSSPKSAEQFLKTHDNIFASRPKLQVSEHMFYGGKGLGLAPYGAYWRNMKKLCTLHLLSSSKVEMFASLRSEEVRMLLKSIDKAATLGEVVNLSEITGEVIANITYKMVLGYNKDSDLDLKGLIRDAMNLAGTFNLADFLPWLSIFDLQGLTSRMKKTSKTFDQIAEKIIKDHENDMKKDPHQKDFIDILLSLMHQSMDPNDEEQKHVIDRTNIKAIILDMIGGALDSSSATIEWTMSELLRHPNVMKKLQNELENVVGVNSNVKENDFENLPYLNMVIKETLRLYPAGPLLGPRECLQDVTIDGYNIKKNSRIIINAWALGRDPNVWTNNCDMFYPERFVNSNVDLRGHDFELIPFGSGRRGCPGIQLALNMVRLVVAQLVHCFDWELPFGMSPNDLDMTEKFGLSMPRYNDLLAVPTTRGQKFDI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03230 506 PANTHER CYTOCHROME P450 93A3-LIKE 3 500 - -
Tsu03g03230 506 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Tsu03g03230 506 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03230 506 Coils Coil 326 346 - -
Tsu03g03230 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03230 Tsu-Chr3 44598034 44600559 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03230 27 499 Cytochrome P450 AT3G48310 40.919 1.01e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03230 - - gmx:100798918 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03230 03 44598034 44600559 Tsu03g03230 03 44598034 44600559 ECH
Tsu02g00175 02 1338004 1340106 Tsu03g03230 03 44598034 44600559 PCT