Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03228 ATGTTACCTCTAACATTGGCTATTCCTTCTATACTCTTTCTAATATTCATTTTGATTATATTTCAtccaaaacatcatcaacaacataataaaaaacatCCACCTGGTCCTAAACCTTTGCCAATTATTGGTAACCTTCACATCCTAGGAAAACTCCCACATCTTACCCTTCAATCCCTTGCCCAAAAATATGGACCAATCATGTTATTAAAACTAGGAAAAATTCCAACAATTGTAGTTTCATCTCCCAAATCAGCTGAACAATTTCTCAAAACTCATGACACTATTTTTTGTAGTAGACCCAAACTTCAACTCTCCGAACACATGTGGTACGGAGGAAAAGGATTGGGCCTAGCTCCATATGGGCCGTATTGGCGTAATATGAGAAAACTTTGTACTTTGCATCTTTTGAGTAGTTCGAAAGTTGAGATGTTCGCGCCTCTGAGGAGTGAGGAATTAAAGATTATGTTAAAATCGGTTGAGAAAGCTGCGAATCTAGGTGAAGTTGTGAATTTAAGTGAGATGATTGGTGAGGTTGTAGCGAATATTACTTATAAGATGGTTTTGGGATGTAATAAGGATAGTGATTTGGATTTGAAGGGACTTATTCGCGAAACAATGAACTTGGCTGGAAGTTTTAATTTGACAGATTTTTTGCCTTGGCTAAGCATCTTTGATCTTCAGGGACTAACAAGtcaaatgaagaaaataaacaaggaaTTTGATCAAATTGTGGAGAAGATAATCAAAGATCATGAGCATGACATGATAAAAGACCCTCACCATAAGGACTTTATCGATGTGTTACTATCATTAATGAATCAACCAATGGATCCTAATGATGAAGAACAAACACATGTCATTGACAGAACTAATATAAAAGCTATTATATTAGACATGATTGCTGCATCATTAGACTCATCTTCAACAACAATTGAATGGGCCATGTCCGAACTCTTAAGGAATCCAAATGTGATGAAGAACCTTCAAAATGAGCTAGAAAATGTGGTAGGTTTGAATAATAAGGTAAAAGAAAATGACTTTGAAAAATTACCTTATCTTAATATGGTATTAAAGGAGACATTTAGATTACACCCATCTGGTCCTTTGCTAACACCTCGTGAGTGTCTAAAAGATGTTACAATTGATGGATACTATATAGAGAAAAATTCTAGGATAATAATCAATGCCTGGGCATTAGGGAGAGACCCTAAATTTTGGACGGATAATTGTGACATGTTTTATCCAGAGAGATTTGTGAATAGTAATGTAGATTTTCGAGGACATGATTTTCAACTTATACCATTTGGATCGGGTCGTAGAGGGTGCCCTGGAATTCAGTTGGGCCTAAATACTGTTAGTCTTGTTGTCGCCCAATTGGTACATTGCTTTGATTGGAAACTTCCATTTAATATGTCTCCTAATGACTTGGATATGACTGAGAAATTTGGACTCTCAATGCCAAGATGTAATCCCTTGCTAGTTGTGCCATCAACTCGAATACAAAGTTTTATTGTATAG 1521 0.3485 MLPLTLAIPSILFLIFILIIFHPKHHQQHNKKHPPGPKPLPIIGNLHILGKLPHLTLQSLAQKYGPIMLLKLGKIPTIVVSSPKSAEQFLKTHDTIFCSRPKLQLSEHMWYGGKGLGLAPYGPYWRNMRKLCTLHLLSSSKVEMFAPLRSEELKIMLKSVEKAANLGEVVNLSEMIGEVVANITYKMVLGCNKDSDLDLKGLIRETMNLAGSFNLTDFLPWLSIFDLQGLTSQMKKINKEFDQIVEKIIKDHEHDMIKDPHHKDFIDVLLSLMNQPMDPNDEEQTHVIDRTNIKAIILDMIAASLDSSSTTIEWAMSELLRNPNVMKNLQNELENVVGLNNKVKENDFEKLPYLNMVLKETFRLHPSGPLLTPRECLKDVTIDGYYIEKNSRIIINAWALGRDPKFWTDNCDMFYPERFVNSNVDFRGHDFQLIPFGSGRRGCPGIQLGLNTVSLVVAQLVHCFDWKLPFNMSPNDLDMTEKFGLSMPRCNPLLVVPSTRIQSFIV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03228 506 PANTHER CYTOCHROME P450 93A3-LIKE 3 501 - -
Tsu03g03228 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Tsu03g03228 506 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 Coils Coil 227 247 - -
Tsu03g03228 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 501 - -
Tsu03g03228 506 Coils Coil 326 346 - -
Tsu03g03228 506 Pfam Cytochrome P450 34 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g03228 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03228 Tsu-Chr3 44584311 44588063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03228 4 501 Cytochrome P450 AT5G07990 41.026 1.12e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03228 - - gmx:100782715 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03228 03 44584311 44588063 Tsu03g03228 03 44584311 44588063 ECH