Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03206 ATGAATACACCATCTAACAACCATACCACTGAGCCAAGGGATGTTGCTAGTTCGAGTTCTAATTCCACCGGAATTAAGCTACCGCCAAGGAAGCCAGACTCGAAGTTTCGACGTGTTTTACATACCCCACTTATGACAGAACCGCCCGGCACATTACCGAATCAAGTAGGTAATAAGTTTTACGAGGCGTTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACGGAACTAATGAAATCATCTAGTTTGGATAATGCTCCTACTCCATCACTTTTGAGTGTTGTGAATGGTATCCTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCCCTTCGTGTGGCTTGCTTGTTGAGAAAAGTTGTACAAGAGATTGAGCGGCGTATATCAACACAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGCGAAGAGAAATATAAATCAAGAATATCAGTACTCGAGGCTCTTGCGGCAGGAGCACAGGAAGAGAGTAAGCTTGTTCTTACAAGTCAAATTCAACAGTTGAAGAATGAGAATATCATCATAAAGGAAGAAAAAATTGCACATGACTCGAGACCGACTGAGAAGATTGTcaaggaagaaaaaaatgtaaatgacTCGAAACCGATTGAGAAGATTGTCAAAGACGAAAAGAAAGCAAATGACATAATACAGACCGATAACATTAAAGAggaggaaaaaaagaaagaaattgataaaGAAGTTATTAGATTGATTAAAGAAGTAGAagacaaaaatttagaaaaaatggaaattgaTAAAGAAGTTAGTAGATTGATTAAAGAGGTCGAGGACAAAAATACGAAAATTTCAACATTGGAGCAAGACTTAGAAACAATCCAAAAAAGATATGAAGTGGAATGCTCAAAGATGGAATCAGAAGCTAAGGATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAGGTCGAGGACAAAAATATGGAGATTTCGACATTGAAGCGAGACTTAgaaacaatcaaacaaagatATGAAGCACAATGCTCAAAGATGGATTCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGGTTGAATAAAGAGATGGAGGATAAAAATACGGAAATTTCTACATTGAAGCGAGACatagaaacaataaaaaaacgaTATGAAGAACAATGCTCAAAGTTGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGGTTGAATAAAGAGATGGAGGATAAAAATATGGAAATTTCTACATTGAAGCGAGACATAGAAACAATCAAAAACCGATATGAAGAACAATGCTCAAAGTTGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAGATGGGGGATAAAAATATGGAAATTTCAACATTGAAGCAAGACATAGAAACGATAAAAAAACGATATGAAGAACAATTCTCAAAGTTGGAATCAGAAGCTAAGGATTCTAAAGGAGAATGGATTAAAGAGGTGGAAGAGAAAAATATGGAAATTTCAACATTGAAGCAAGACttagaaacaataaaaaaaagttgctCAAAGTTGGAATCAGAAGCTAATAATTCTAAAGGAGAATTGATTAAAGAGgtggaaaacaaaaatatggaaatATCGACGTTGAAGCAAGAGTTAGAAACAACTAAAAAAAGTTATGAAGTACAATGCTCAAAGTTGGAATCAGAAGTTAAGGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAGGATCTATTGGAAAAGTTAAGAAATAAGCTTCAAGAGAGTGAAACTTTGACTAAGTTAAAATTTGAGAAGTGGAATAGGAAAGAAAACCTAATGCAGAAAGCTATGACTTTTCAGTTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCAATTAAGCAAGATGTTATGAAAGAGCAAACGATGTACTCAGAGGAATGCAAAAGATTTGGTGTAAATATTAAACCACTAGTGCATGCAGCTGAGAATTATCATACAGTTCttgaagaaaatagaaaattatttaatgaacttCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTATGCCTggccaaaaagaaaaacaatctaTTGTTGAACGCATTGGTGAATCAGAATTGGTTGTAGCAAATCCagacaaaaaaggaaaagaagcaATCAAAACATTTAAGTTTAATAAGATCTTTGGCCCTGCCTCATCTCAAGCTGAGGTATATGACGACATACAGGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAACAATGCAACCAATGAGAGTCATGGTGTTAACTATAGAGCTCTAAATGATCTCTTCAACATATCAGCAAGCAGACAAAGCTCCATAGTTTATGAAATTGGAGTTCAAATTATTGAGATATATAATGAACAAGTGCGAGATTTGTTATCAACTGATACAACTGTCAAAAAATATCCTTTTTTCACAGTACCTGATGCTACTATGCTCCCTTGTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCAACTGCTATGAATGAACGAAGTAGTCGTTCTCACAGTGTGGTTTCGATTCATGTTCGCGGAGCAGATAAAAAATCCAATTCGACTCTCACAGGTAATCTTCATTTGGTAGATTTGGCGGGAAGTGAAAGGATAGATCGCTCTGAAGTAACCGGAGATAGATTAAAGGAAGCACAGCATATTAACAAATCATTGTCTGCTCTTGGAGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCACATGTACCATATAGAAACAGCAAGCTCACACAAATTTTGCAAACCGCTCTTGGTGGTCATGCAAAGACACTCATGTTAGTTCAAATTAATTCAGAGATAAAGTCTTATTCCGAATCTTTGAGTACTTTAAAATTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCGAAAGACGGAAGAGACGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATCGAGCGACTACAAGTACTTAAGGAtctaaaaaatgttaattctGATAAGCTTGAAGATTAA 3222 0.3262 MNTPSNNHTTEPRDVASSSSNSTGIKLPPRKPDSKFRRVLHTPLMTEPPGTLPNQVGNKFYEAFQQKHGSYADLPAAKITELMKSSSLDNAPTPSLLSVVNGILEESVERRNGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALAAGAQEESKLVLTSQIQQLKNENIIIKEEKIAHDSRPTEKIVKEEKNVNDSKPIEKIVKDEKKANDIIQTDNIKEEEKKKEIDKEVIRLIKEVEDKNLEKMEIDKEVSRLIKEVEDKNTKISTLEQDLETIQKRYEVECSKMESEAKDEMDKEVIRLNKEVEDKNMEISTLKRDLETIKQRYEAQCSKMDSEAKNEMDKEVIRLNKEMEDKNTEISTLKRDIETIKKRYEEQCSKLESEAKNEMDKEVIRLNKEMEDKNMEISTLKRDIETIKNRYEEQCSKLESEAKNEMDKEVIRLNKEMGDKNMEISTLKQDIETIKKRYEEQFSKLESEAKDSKGEWIKEVEEKNMEISTLKQDLETIKKSCSKLESEANNSKGELIKEVENKNMEISTLKQELETTKKSYEVQCSKLESEVKDAKGELKQKSQEYEDLLEKLRNKLQESETLTKLKFEKWNRKENLMQKAMTFQFGSIQQLKLSWESIKQDVMKEQTMYSEECKRFGVNIKPLVHAAENYHTVLEENRKLFNELQELKGNIRVYCRIRPFMPGQKEKQSIVERIGESELVVANPDKKGKEAIKTFKFNKIFGPASSQAEVYDDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATNESHGVNYRALNDLFNISASRQSSIVYEIGVQIIEIYNEQVRDLLSTDTTVKKYPFFTVPDATMLPCKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSNSTLTGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQILQTALGGHAKTLMLVQINSEIKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQVLKDLKNVNSDKLED 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03206 1073 Gene3D Kinesin motor domain 642 1021 IPR036961 -
Tsu03g03206 1073 Pfam Kinesin motor domain 706 1017 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 27 407 - -
Tsu03g03206 1073 Coils Coil 507 615 - -
Tsu03g03206 1073 PRINTS Kinesin heavy chain signature 969 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PRINTS Kinesin heavy chain signature 920 938 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PRINTS Kinesin heavy chain signature 889 906 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PRINTS Kinesin heavy chain signature 774 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PANTHER KINESIN-LIKE PROTEIN KLP-3 546 1061 - -
Tsu03g03206 1073 Coils Coil 1033 1060 - -
Tsu03g03206 1073 Coils Coil 680 700 - -
Tsu03g03206 1073 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 546 1061 - -
Tsu03g03206 1073 Coils Coil 152 172 - -
Tsu03g03206 1073 MobiDBLite consensus disorder prediction 1 36 - -
Tsu03g03206 1073 Gene3D - 360 402 - -
Tsu03g03206 1073 Gene3D - 407 449 - -
Tsu03g03206 1073 Gene3D - 543 578 - -
Tsu03g03206 1073 Gene3D - 503 537 - -
Tsu03g03206 1073 Gene3D - 314 355 - -
Tsu03g03206 1073 Gene3D - 454 496 - -
Tsu03g03206 1073 Gene3D - 266 308 - -
Tsu03g03206 1073 ProSiteProfiles Kinesin motor domain profile. 700 1019 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 407 - -
Tsu03g03206 1073 Coils Coil 312 458 - -
Tsu03g03206 1073 MobiDBLite consensus disorder prediction 1 27 - -
Tsu03g03206 1073 Coils Coil 237 299 - -
Tsu03g03206 1073 SMART kinesin_4 698 1027 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03206 1073 Coils Coil 478 505 - -
Tsu03g03206 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 700 1057 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03206 Tsu-Chr3 44270952 44280102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03206 394 1019 Calmodulin-binding Proteins AT5G65930 30.982 1.76e-64 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03206 K10406 - csv:101213894 1003.82