Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03205 atggcTGCAACTTTGGTGGGAGGTGCATTTCTATCTGCTTCTGTTCAAACAATAATGGACAAACTAACTTCATCAGAGTTTCGAGATTTCGTCAACAACAAGAAGCTGAATATGTCACTTTTGAAGCAGTTAGAGACAACACTACTCACTCTTCATGCTGTTCTAGATGATGCAGAGAACAAGCAGATCAACAATCGTGCTGTCAAACAATGGCTTGATGAGTTGAAAGATGCAATCTTTGATGCAGAAGATTTGCTCAACCAAATCAGTTATGATTCCCTTAGATGCAAGGTGGAGAATAGTAATACAAAGTCAGAAAACATCACTGGTCAGGTTTGGAATTTCCTTTCATCTCCTTTTCAAAACTTGTATGGAGAAATCAATTCTCAAATGAAGAATATGAGTGGAAGGCTCCAACTTTTTGCACAACAAAAAGATATCCTTGGCTTGCAAACTATGAGTGGTAGAGTTTTTCTTAGAACACTTTCAAGTTCAATTGTAGATCAATCTTTCATGGTTGGTAGGAAAAATGATAAAGAGAAACTAATTAATATGTTGCTATCAGATGGTGGTAATATCGGCATTGTCCCAATTTTTGGCATGGGAGGTGTTGGTAAAACAACCCTTGCTCAACTTCTTTACAATGATAAAGAAGTTCAAGGACATTTTGATGTAAAAGCTTGGGTTTGTGTGTCAGAAGAGTTTGATGTTTTGAGGGTATGCAGAACTTTACTTGAATCTATCACTTCAAGTGTTTGGGAAAGTGATAATCTTGATTTTCTTCGAGTCAAATTAAAGCAAAACTTGAAGGACAAAcggtttttgtttgtgttggaTGACGTGTGGAATGATAGCTATAGTGATTGGCATGAGCTAATGACTCCCTTCATTGATGGAAAATCTGGAAGCAGGGTGATCATCACAACACGTCAACAAAAAGTTGCCGAGGTCACACATACATTTCCTATCCATAAATTAGAACCTCTATCAGATCAAGATTGTTGGTCATTACTCTCAAAACATGCATTTAGAAGTGAAGACTTTTGCGGTCGTAAATACCTAAGCCTAGAAACAATTGGTAGGAAGATTGCAAAAAAGTGTTGCGGATTACCAATAGCTGCCAAAACACTTGGAGGACTTCTACGCTCAAAAGTAGATGCAAAAGAGTGGAGTACAATTTTAAATAGTGACATATGGAATTTTCCAAATGATAATGTTCTCCCTGCATTGCATTTGAGTTATCAATATCTTCCTTCTCATTTGAAAAGATGTTTTGcttattgttcaatttttccaAAGGGTTATTTTCTTGAGAGGGATCAAATGGCTTTGTTATGGATGGCTGAAGGTTTTCTTGAACATTCTCAAGGAAAAAAAGCAATGGAGGAAGTAGGTGATGACTACTTCGTTGAATTGTTATCTAGATCTTTAATTCAACAATCAAATGATGTTTCTGTTAGACAAAAGTTTTTCATGCATGATCTTGTCAGTGATTTAGCTACAATTGTATCTGGAAAAAGTTGTTGCAGAGGTGAACATGGCAGTAACATTTCTGTAAATGTCCGTCATTTGTCATATAACCAAGAAGAGTTTGACATTTTCAAAAAGTTTGAGAATTTCTACGATTTCAAAGGCTTGCGAAGCTTTCTACCCCTTGGCATCTGGTGGCGACAATCTTACTTATCTAAAAAAGTGGTTGATGATTTGATACCCTCACTTATAAGGCTGCATGTGTTATCGTTATCAGGTTATAGAAACATCACCATGCTACCAGATTCAATTGGGAGTTTGGTGCAGTTGCGTTATTTAGATCTCTCCAACACTAGAATTGAAAGTTTGCCTGATACAATTTGTAACCTTTGCTATTTGCAAACATTGATTTTATCGTATTGCAATCATCTCGTTGAATTGCCGGTACATATTGGAAAGTTAATTAATTTACGTCACTTAAACATTAATTGGACGAACATAAAGGAGATGCCAATCGAGATTCTTGGACTAGAAAACCTTCagattttgacaaattttgtaGCAGGCAATAAAAAAGAGGGGTTAAGTGTGAGAGAGCTCGGTAAGTTTCCTAACCTACATGGAAAACTTTGCATCCAGAAGTTGCATAATGTCATTGACGTCGTTGAAGCATATGATGCCAACTTGAAGAGCAAAGAACATATCGAGGAATTAGTGCTACGTTGGGGTGAACTAACCAAAGATTCACAAACTGCAAAAGCTGTGTTTGATGCATTGCAACCATCAACAAACTTGAAGAAACTGAGCATAGAGTTCTATGGCGGAACAAGTATTCCATGTTGGTTGGGAGATTCGTCATTCTCTAATATGGTGACCCTTTTCATCAGTAATTGTACATATTGCATGACACTTCCACCACTAGGGCAACTACCTTCTCTCAAGGACTTGACTATTAGAGGCATGACGACATTGGAGACAATTGGTGCAGAGTTCTATGGCATGGTGGGAGGAGGTTCCAGTTCTTCATTTCAACCATTTCCATCCTTGGAGATTCTGAAATTTCAGAACATGTTAAATTGGAAGGAATGGCTTCCCTTTGTTAGCAACAAAATTCCTTTTCCCCGTCTTAAATGTCTTAGGTTATTCGAATGTCCTAAACTGATAGGATGCTTGCCTAGCCATTGTTTTTCCATAGAGCAAATTGGAATATATGGTTGTGATCTTCTCTTGGCAATACCACCTACTCTAAATTGGATCTCGTCAATAAAAGTATTAACAATTGAGGGAGATTTAGATTCTCAAGAGTCTACTGAAAGAATCCAATGGTCATTGATTGAGACTGATTCTCCATGTCAGCTGCAGCGTGCATCAGTCCGTTGTTGTCACACACTTCTGTCTCTACCTAAAACGATTCTAAGCAGCACTTTTCTCCAACACTTGGAACTTTATAATCTTCCATATCTCACTGCATTTCCAGCAGATTGTCTACCAACTTCATTGCAATTACTCAGAATTATTGACTGTGAGAATTTAACATTTTTGCCTCCTGCTATGTGGCATAAATATGTGTCACTTATGACGTTGGAGTTAGGGAATAGCTGTAACACACTTACCTCCTTTCCATTGGATGGTTTCCCCGCGCTACAAAGTCTTTCCATTGATGGTTGTAGGTGTCTAGAATCCATTTTTATATCAAACAGTTCTTGTATCGCAACTCTTGAATGTTTGACTCTCATAGATCTTCCAAAACTGAAGTTATCATTTGGTGAAGGAGCTTGCCTACTTCCCAAGTTGAGATCATTTCATATTAAATCCGTGAGAGTAACGATGCCTTTAGTTAAATGGGGTCTCCAACGCCTAACCGCGCTTTCAGATTTGGATATTGGAGGTGATGATATTGTTAACACTTTATTGAAGGAGAAGTTGCTTCCTATTTCCTTAGTGTCTTTGACAATCACTAATCTCATTGAAATGAAATCATTAAAAGGAAATGTGTTTCAACACTTCTCCTCTTTGGAAAGCCTTCACTTTCTAGATTGTCCAGGACTCGAGTCTCTGCCAGAAGACACATTGCCTTCATCTCTTAAGTTACTGAGCATCAGAAAATGCCCGCAGTTAGAAGCGAGGTCCTATGCTAGCATACCTACTGTTGTATCTGATGCTAGAGGATTAACTGAAGATCTTGTTCTATAA 3663 0.3724 MAATLVGGAFLSASVQTIMDKLTSSEFRDFVNNKKLNMSLLKQLETTLLTLHAVLDDAENKQINNRAVKQWLDELKDAIFDAEDLLNQISYDSLRCKVENSNTKSENITGQVWNFLSSPFQNLYGEINSQMKNMSGRLQLFAQQKDILGLQTMSGRVFLRTLSSSIVDQSFMVGRKNDKEKLINMLLSDGGNIGIVPIFGMGGVGKTTLAQLLYNDKEVQGHFDVKAWVCVSEEFDVLRVCRTLLESITSSVWESDNLDFLRVKLKQNLKDKRFLFVLDDVWNDSYSDWHELMTPFIDGKSGSRVIITTRQQKVAEVTHTFPIHKLEPLSDQDCWSLLSKHAFRSEDFCGRKYLSLETIGRKIAKKCCGLPIAAKTLGGLLRSKVDAKEWSTILNSDIWNFPNDNVLPALHLSYQYLPSHLKRCFAYCSIFPKGYFLERDQMALLWMAEGFLEHSQGKKAMEEVGDDYFVELLSRSLIQQSNDVSVRQKFFMHDLVSDLATIVSGKSCCRGEHGSNISVNVRHLSYNQEEFDIFKKFENFYDFKGLRSFLPLGIWWRQSYLSKKVVDDLIPSLIRLHVLSLSGYRNITMLPDSIGSLVQLRYLDLSNTRIESLPDTICNLCYLQTLILSYCNHLVELPVHIGKLINLRHLNINWTNIKEMPIEILGLENLQILTNFVAGNKKEGLSVRELGKFPNLHGKLCIQKLHNVIDVVEAYDANLKSKEHIEELVLRWGELTKDSQTAKAVFDALQPSTNLKKLSIEFYGGTSIPCWLGDSSFSNMVTLFISNCTYCMTLPPLGQLPSLKDLTIRGMTTLETIGAEFYGMVGGGSSSSFQPFPSLEILKFQNMLNWKEWLPFVSNKIPFPRLKCLRLFECPKLIGCLPSHCFSIEQIGIYGCDLLLAIPPTLNWISSIKVLTIEGDLDSQESTERIQWSLIETDSPCQLQRASVRCCHTLLSLPKTILSSTFLQHLELYNLPYLTAFPADCLPTSLQLLRIIDCENLTFLPPAMWHKYVSLMTLELGNSCNTLTSFPLDGFPALQSLSIDGCRCLESIFISNSSCIATLECLTLIDLPKLKLSFGEGACLLPKLRSFHIKSVRVTMPLVKWGLQRLTALSDLDIGGDDIVNTLLKEKLLPISLVSLTITNLIEMKSLKGNVFQHFSSLESLHFLDCPGLESLPEDTLPSSLKLLSIRKCPQLEARSYASIPTVVSDARGLTEDLVL 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03205 1220 PRINTS Disease resistance protein signature 195 210 - -
Tsu03g03205 1220 PRINTS Disease resistance protein signature 268 282 - -
Tsu03g03205 1220 PRINTS Disease resistance protein signature 367 381 - -
Tsu03g03205 1220 PRINTS Disease resistance protein signature 595 611 - -
Tsu03g03205 1220 Coils Coil 41 61 - -
Tsu03g03205 1220 Gene3D - 413 502 IPR036388 -
Tsu03g03205 1220 PANTHER DISEASE RESISTANCE PROTEIN RP 48 1009 IPR044974 GO:0006952
Tsu03g03205 1220 Pfam NB-ARC domain 176 395 IPR002182 GO:0043531
Tsu03g03205 1220 PANTHER - 48 1009 - -
Tsu03g03205 1220 SUPERFAMILY L domain-like 492 918 - -
Tsu03g03205 1220 Pfam Rx N-terminal domain 10 104 IPR041118 -
Tsu03g03205 1220 Gene3D - 328 412 IPR042197 -
Tsu03g03205 1220 Gene3D - 158 321 IPR027417 -
Tsu03g03205 1220 Gene3D - 14 123 - -
Tsu03g03205 1220 ProSiteProfiles Leucine-rich repeat profile. 599 620 IPR001611 GO:0005515
Tsu03g03205 1220 Gene3D Ribonuclease Inhibitor 934 1052 IPR032675 -
Tsu03g03205 1220 SUPERFAMILY L domain-like 937 1196 - -
Tsu03g03205 1220 SMART LRR_typ_2 597 620 IPR003591 -
Tsu03g03205 1220 SMART LRR_typ_2 644 667 IPR003591 -
Tsu03g03205 1220 Gene3D Ribonuclease Inhibitor 1077 1213 IPR032675 -
Tsu03g03205 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 428 IPR027417 -
Tsu03g03205 1220 Gene3D Ribonuclease Inhibitor 556 933 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03205 Tsu-Chr3 44263742 44267920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03205 180 817 WRKY Transcription Factor Family AT5G45050 22.727 1.03e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03205 - - mtr:MTR_3g032370 1380.93