Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03181 ATGGCAACATCTTGTAAGTTTGATCCATCTTCCAGTAGCCTAGATAGACCACTATACACTGCGCAGCATGGATCCAACATAGCTGCTTCATTAGATAGACCAGGTAGCTTTCGAGAATGCACCGAAAATCCAAATCAAAAGTCTAATCGTCACGTGGATTATAAGCGACATGTTAATGCTGCTCTTGGAATTTCACCGGATGAATCTCCATCTAGTTCTGCAAAAGGAAAGCTAATACCATGCCCAGTACCAGAAGATGTAAAGCATATGAGGGATAGTTTGTATTTAAGCACTGTGAAGAAGAGGGAACGTGTGAAAATGTTCAATGAGGCCTTATCTGTATTCAATGTGAAGAAGAGATCTCGAGTTGAAGGGTTTTCCAGTGACCGATCTAGTGTCATGTTGCTGATTGATAACTTAGTGAAGGGAACTTCAGatgatgatgaagaagaatcgGTTGCTTTGCATCCTTGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTTAATATTCTACGTGAAAATAATGTAGAACTTGCTGGAGATCGGCCAAGGACAGTTATGAGGCCTCCTCAGGTTCTTCATGAAGGCACAAAGAAAACTGTGTTTGTGAATTTTATAGATATGTGCAAAACGATGCATCGACAGCAAGACCATGTTATGGCTTTCTTGATTGCTGAACTGGGGTATTAG 720 0.4042 MATSCKFDPSSSSLDRPLYTAQHGSNIAASLDRPGSFRECTENPNQKSNRHVDYKRHVNAALGISPDESPSSSAKGKLIPCPVPEDVKHMRDSLYLSTVKKRERVKMFNEALSVFNVKKRSRVEGFSSDRSSVMLLIDNLVKGTSDDDEEESVALHPCYPWEGSDRDYEYEELLGRVFNILRENNVELAGDRPRTVMRPPQVLHEGTKKTVFVNFIDMCKTMHRQQDHVMAFLIAELGY 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03181 239 Gene3D - 165 239 - -
Tsu03g03181 239 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 167 238 IPR016189 GO:0003743|GO:0006413
Tsu03g03181 239 Pfam Domain found in IF2B/IF5 192 238 IPR002735 GO:0003743|GO:0006413
Tsu03g03181 239 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 126 238 IPR045196 GO:0003743|GO:0006413
Tsu03g03181 239 PANTHER BNAA02G05130D PROTEIN 126 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03181 Tsu-Chr3 43875295 43877734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03181 150 238 Eukaryotic Initiation Factors Gene Family AT5G20920 79.775 9.05e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03181 K03238 - gmx:100775655 176.407