Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03162 ATGTTCTTCTCCAAATTCTTCTCCTGTTTGCAAAAGTGTCTGAAGAAGCACCGCACTGTCTCTGATGACAACGACGACGACAAAGATACCATAGATGCTGTTAATTCTTCTTCAAATCTGTTATTTGAGCTTCATACTCTTCAGCTTGCTACCAATTTCTTCTCTGAGCTTAATCAACTTGGTCGTGGAGGCTTTGGTCCTGTTTTTAAGGGATTGATGCCAAATGGTGAAGAAGTGGCAATTAAAAAGCTGTCATTGGAATCTAGACAAGGAATTCGTGAATTTATGAACGAAGTTCGGCTATTACTAAGAGTTCAGCACAAGAATTTAGTCACTTTATTAGGTTGTTGTGCAGAAGGACCAGAAAAGATGCTTGTCTACGAATATCTACCAAACAAAAGCCTTGACCATTTTCTATTTGATAAAACGAGGTCCTTAGATTGGACGACACGATTTAAAATAATTACCGGTGTGGCAAGAGGACTTCTCTACCTGCACGAAGAGGCCCCGGAAAGAATTATTCATAGAGACATTAAAGCTAGTAACATATTGCTAGACGAGAAATTAAATCCGAAAATTTCAGACTTTGGTTTGGCAAGACTGTTTCCTGGAGAGGATACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCAATGCGTGGATATCTTTCTGTAAAGACTGATGTTTTCAGTTATGGAGTGTTGGTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGATGCGAAGCTTGGTTCAGAAAAGGCAGATCTTCTAAGCTATGCATGGAAGCTTTATCAAGGAGGGAAGGTTATGGATTTAATAGACCAAACCCTAGGTAAATACAACGGCAACGAGGCTGCAATGTGCATTCAACTAGGTTTATTATGCTGTCAAGCAAGTATAGTAGAAAGACCAGACATGAATTCAGTTCATCTTATGTTATCAAGTGATTCATTTACTTTGCCAAGACCAAGTAAACCAGGAATTCAAGGTCGTGTAGGAAAATGGAATACAACTAGTACTTCTGCTTTGACAAATACTAATGCTAGTAGTGCAACAAAAGCTTCAGGTGGTAGTAGTTTTGTAGAAGATTATTCTAGAAATTCTATTTCTACTTCTTCTTTTGATGAAGATGCAAAAGAAACTGTGGCGATTGAGGACCGACCATCCAATTGTGCGCATTTGTCTAATACATATAGAGGACCATGCGTCGGGTTCCTTGGTGCTAGTGCTGTCTGTAACGTTGTCTGCATAGATGAAAGTCAGAGCTACAGGAGTGGCGATTGCTATGACTGGCAGTGTTGGTGCTGGGAAAAAGGCTGTCAAGTTGATCAAAAGAATGGATTATTATCTATTCTTGAACACCAAGATGCATGA 1401 0.3954 MFFSKFFSCLQKCLKKHRTVSDDNDDDKDTIDAVNSSSNLLFELHTLQLATNFFSELNQLGRGGFGPVFKGLMPNGEEVAIKKLSLESRQGIREFMNEVRLLLRVQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKTRSLDWTTRFKIITGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTHVQTFRISGTHGYMAPEYAMRGYLSVKTDVFSYGVLVLEIVSGRKNHDAKLGSEKADLLSYAWKLYQGGKVMDLIDQTLGKYNGNEAAMCIQLGLLCCQASIVERPDMNSVHLMLSSDSFTLPRPSKPGIQGRVGKWNTTSTSALTNTNASSATKASGGSSFVEDYSRNSISTSSFDEDAKETVAIEDRPSNCAHLSNTYRGPCVGFLGASAVCNVVCIDESQSYRSGDCYDWQCWCWEKGCQVDQKNGLLSILEHQDA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03162 466 Pfam Protein tyrosine and serine/threonine kinase 58 270 IPR001245 GO:0004672|GO:0006468
Tsu03g03162 466 SUPERFAMILY Protein kinase-like (PK-like) 33 322 IPR011009 -
Tsu03g03162 466 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 385 - -
Tsu03g03162 466 CDD STKc_IRAK 60 322 - -
Tsu03g03162 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Tsu03g03162 466 Gene3D Transferase(Phosphotransferase) domain 1 130 328 - -
Tsu03g03162 466 Gene3D Phosphorylase Kinase; domain 1 15 129 - -
Tsu03g03162 466 SMART serkin_6 54 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03162 466 Gene3D - 399 449 IPR036574 -
Tsu03g03162 466 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 385 - -
Tsu03g03162 466 ProSiteProfiles Protein kinase domain profile. 54 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03162 Tsu-Chr3 43704770 43711915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03162 32 383 Receptor kinase-like Gene Family AT4G21410 49.441 3.18e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu03g03162 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03162 - - aprc:113868075 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03162 03 43704770 43711915 Tsu03g03162 03 43704770 43711915 ECH