Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03136 ATGGAGTGTAAGAATAGTATTCAAGTTCCAGGCCTAAAGAATCCCTTCATAGACAATTCAAGTATTGCAgtgaatattttaaatgaagGATTTGAGGTTAATTGGAGTGGTGTGGATCAAGATACGTGTGATGGCTGCACGAAATCTGGTGAACGATGTGGATATAACACATCAGAAAATGCAGTTATGTGTGTCTTAAAGAAATCTGCGCCACCAACAAATGGAACATGGGACTGGAAGAAGAAGCTTATTGTTGGTGTTGTTGCTTCTGCTGTATTGGCAACACTTGCTGTAATCACAGCCATTTATTTTTACCGGCGCCAAAATAATGGCAGTTCTCCGGAGTCAAATGTGCGGTCTCTCAGCCTCTCTTCTCAACCATCTGAAAACTTCCCTGACGTTAAGATTTTCACTCCGGAAGATCTTGCCTCAGCCACAAACCAGTTTGACACTGTACTAGGATCAGGGATCACTTCGACTGTGTATGAGGGCAATTTGGAAGGGGGGCATCGTGTTGCAGTGAAGGTGTTAAATTACAAGAATGATGCACAATTTATAACTGAAGTTCAGAATCAAGCTAAACTTTCCCATCCAAATCTTGTGGTGCTACACGGTTGCACTTCGATCGGTAGCAACCAACATATGATTGTCTTTGAGTATGTTGGCAATGGAACTCTGTATGGTTATCTTCATGATGATAGAGGAAAATATGTCAGGCTCACTTGGGATAATAGGATGACTATTGCTGTGGAGATAGCAAGTGTGTTGACGTATCTTCATGCTTCTAACATCGTCCACAGAGACATCAAATCAAGCAATATTTTTCTCAATGACAATTTGCACGCCAAATTAGGAGATTTTGGAATCGCGCGCCATTTTCCAGAGGATCAAAGCCATGTTGAAACAGATCCACACGGGACATTAGGGTATGTCGATCCGGAATACCATAGAGAATCTAAGCTTACTCACAAAAGCGACGTTTTTAGCTTTGGAGTCGTATTGATCGAACTGATATCATCTAAGCATGCTTATGTTAACAAAAGAGATGATCAGCATCTTTCTGCCATGGCTAAGAACAAACTTGAAAATAATGCTTTGGATGAACTTGTGGATGACTCCCTAGGTTTTGATTTAGATCAGAGAGTGGAGGAAATGATGAGGGGCGTGGCTGAGTTAGCAGTGCGGTGTGTGCAAGATTCTAGAGATGCGAGACCTTCCATGGATGAAGTGCTCGTAGCTTTACAAACCATTCAGAATGCAGGCCAACTTGAAGCAGTGGACAATTATAACccagatgatgatgattttgatgggATTGTGGAATTGTTGAATTGTTGA 1338 0.4051 MECKNSIQVPGLKNPFIDNSSIAVNILNEGFEVNWSGVDQDTCDGCTKSGERCGYNTSENAVMCVLKKSAPPTNGTWDWKKKLIVGVVASAVLATLAVITAIYFYRRQNNGSSPESNVRSLSLSSQPSENFPDVKIFTPEDLASATNQFDTVLGSGITSTVYEGNLEGGHRVAVKVLNYKNDAQFITEVQNQAKLSHPNLVVLHGCTSIGSNQHMIVFEYVGNGTLYGYLHDDRGKYVRLTWDNRMTIAVEIASVLTYLHASNIVHRDIKSSNIFLNDNLHAKLGDFGIARHFPEDQSHVETDPHGTLGYVDPEYHRESKLTHKSDVFSFGVVLIELISSKHAYVNKRDDQHLSAMAKNKLENNALDELVDDSLGFDLDQRVEEMMRGVAELAVRCVQDSRDARPSMDEVLVALQTIQNAGQLEAVDNYNPDDDDFDGIVELLNC 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03136 445 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524
Tsu03g03136 445 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 424 - -
Tsu03g03136 445 Pfam Protein tyrosine and serine/threonine kinase 149 411 IPR001245 GO:0004672|GO:0006468
Tsu03g03136 445 Pfam Wall-associated receptor kinase C-terminal 2 66 IPR032872 -
Tsu03g03136 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Tsu03g03136 445 Gene3D Transferase(Phosphotransferase) domain 1 221 436 - -
Tsu03g03136 445 Gene3D Phosphorylase Kinase; domain 1 120 220 - -
Tsu03g03136 445 ProSiteProfiles Protein kinase domain profile. 147 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03136 445 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 424 IPR044652 -
Tsu03g03136 445 SUPERFAMILY Protein kinase-like (PK-like) 129 415 IPR011009 -
Tsu03g03136 445 SMART serkin_6 147 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03136 Tsu-Chr3 43305683 43308252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03136 43 422 Receptor kinase-like Gene Family AT1G25390 40.665 2.67e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu03g03136 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03136 - - gmx:100800873 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03136 03 43305683 43308252 Tsu03g03136 03 43305683 43308252 ECH