Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03132 ATGCTAGGACTTCCTTGGAACACTAGGATGAAGATTGATGTGGAGACGGCAACTGCATTGCAGTATGTTCATGCTTATAACATTATCCATGGAGACATTGAAACCAGAAATATTCTTCTTAATGCTGAGCGTCATGTCAAATTAGGAGACTTTGGACTCTCGCGCGGTTTTCCAAATGGTCATAGCCATGTTTCAACAGGTCCACAAGGAACTCTAGGTTACATGGACCCCAAGTACCATCATCGGTCTGAGCTCAATTGTAAAAGCGACGTCTTCAACTTTGGAGTGGTGATGATTGAGCTGATATCATCTTTGCGTCCTTATGATATTACTAGGTCTGATCACTATCTGTCGGACATAGCTAAGAACTGA 372 0.4247 MLGLPWNTRMKIDVETATALQYVHAYNIIHGDIETRNILLNAERHVKLGDFGLSRGFPNGHSHVSTGPQGTLGYMDPKYHHRSELNCKSDVFNFGVVMIELISSLRPYDITRSDHYLSDIAKN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03132 123 Gene3D Transferase(Phosphotransferase) domain 1 2 123 - -
Tsu03g03132 123 Pfam Protein tyrosine and serine/threonine kinase 7 117 IPR001245 GO:0004672|GO:0006468
Tsu03g03132 123 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03132 123 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 121 IPR044652 -
Tsu03g03132 123 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 121 - -
Tsu03g03132 123 SUPERFAMILY Protein kinase-like (PK-like) 3 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03132 Tsu-Chr3 43191905 43192276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03132 4 123 Receptor kinase-like Gene Family AT1G25390 54.098 2.01e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu03g03132 PK_Tyr_Ser-Thr 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03132 - - han:110923395 142.895