Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03071 ATGGGAAGCATTATGACAGAAAAAGTGAAGCTTCTTGTGGCATTACTTGCTCTACAATTCTGTTTTGCAGGATTTCACATTGTCTCTAGACTTGCACTAAACATTGGTGTTAGCAAAGTTGTTTACCCTATTTATAGAAATTTAATTGCATTAGTTTTGTTGAGTCCACTTGCTTACTTTTTAGAAAAGGATCAAAGACCACCCCTTACTCTATCTTTGTTGGTTCAATTCTTCCTATTGGCATTATTGGGGATTACTGCAAACCAAGGATTTTACTTGTTGGGTTTATATTATGCTTCTCCTACTTTTGCTTCTGCAATGCAAACTTCAGTTCCTGCCATCACTTTCATATTGGCCTCAGCTTTAAGACTTGAGGAAACCAACATTGCAAGAAGAGATGGATTAGCAAAAGTTGTAGGAACCATTGCAAGTGTAGGAGGTGCCACTATAATTACCCTTTACAAAGGTCCTCCTCTTCTTCACCTTCAAATGGACCAAATACAAGGAGACAATACCTTACAAATAGATGAGTCCTCAACAAACATGCAAAATTGGACTTGGGGTTGCATATACTTGCTTGGACATTGTGTATCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCTAAACTCACACTGACATCATTTACATGTTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCTTTCACtgaaaatgattttgaaaaGTGGAAGATACAATCTTCAGAAGAGCTTTTTACCATCCTATATGCTGGAATTGTAGCATCAGGCATTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTCTTTGTTGCTGTCTTCCAACCAATACAAACTTTTCTAGTTGCTCTCATGGCTGCACTTATTCTTGGAGATCAATTATACTTAGGGGGGATTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTAGTTCTATGGGGTAAAACCAATGAAAAAAAGACGAATGAGACATCATCATTAACAAAGCCGTTGCTTGATTCAAACGAAGAGAAGAAAATTATTGATGCAGCTTCAAAAGACATACCTTAA 1089 0.3756 MGSIMTEKVKLLVALLALQFCFAGFHIVSRLALNIGVSKVVYPIYRNLIALVLLSPLAYFLEKDQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASAMQTSVPAITFILASALRLEETNIARRDGLAKVVGTIASVGGATIITLYKGPPLLHLQMDQIQGDNTLQIDESSTNMQNWTWGCIYLLGHCVSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFTENDFEKWKIQSSEELFTILYAGIVASGIVISLQTWCIQKGGPVFVAVFQPIQTFLVALMAALILGDQLYLGGIIGAILIVLGLYLVLWGKTNEKKTNETSSLTKPLLDSNEEKKIIDAASKDIP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03071 362 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Tsu03g03071 362 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020|GO:0016021
Tsu03g03071 362 PANTHER WAT1-RELATED PROTEIN 8 341 IPR030184 GO:0016021|GO:0022857
Tsu03g03071 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
Tsu03g03071 362 PANTHER WAT1-RELATED PROTEIN 8 341 - -
Tsu03g03071 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03071 Tsu-Chr3 42245562 42248652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03071 4 351 Nodulin-like Gene Family AT3G18200 66.760 3.86e-173 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03071 - - gmx:100812601 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03071 03 42245562 42248652 Tsu03g03071 03 42245562 42248652 ECH