Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03041 ATGGTTGTGAATTGTGGTGTTGAATGTAGCATTCAACTATTGGAACCATTGCAAGGTCTAACAATTGCTAATGAAGTCACTCAAAATTTAGAGGACTCAACTCCTAATAGCAAGAAACACCCGCAACCAACATGGAACACTGAACAAAATTTGGTGTTACTTAGTGGGTGGATTAAATTTTCAACTAACAGTGTTGTTGGGAGAAACCAAAAACGTGAAATGTATTGGGGTAATATTGCTGAGTATTGTAATGAGCATTGCAAATTCGATCTTCCGCGTGATGATTATTTCTCTGTTTCATTGCTTCTCCTTCACCTTCTCTTCTATTCTTTCTTCCTTCGATCTTCATTCTCAATCGCTCTTCCATTTCTGTGGATTGAGATGGCTGGAGGTGTTATTCAACAGTTATTGAGGAGGAAACTCCAATCTCATTCTCCTAATCCTTTATCTATGTCATCCATTATCACAAAGAATGATGGTGCTGGCTCTACAAGCAGCGGATCCTTAAGAGCCCTTGCACTAATTGGTGCTGGTGTATCAGGGTTATTGAGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGGCTGCTCCAAGCTATCCATGGCCTCACGAGGGCATCCTCAGCTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGGTATCATACCGTGATTTGGTTGGTGTTGCTTACACGGAAGCGGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCCGGTAAACTCAGTGATCGCTTTCCTCAGCCATATCCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCCCTCCTAACCGGTTATCGTGACCCTCCTGCTGGTGTTTCGATCAGAGAAGGATTGCATTACAATCCTTATTTTCCTGGTGGAGCCATTGCCATGCCTAAGATGCTTAATGATGGCGCTGTTGAGTATGAAGATGGTACCCCTGCTACAGAAGCTCAGATGGGGAAAGATGTTGTGTCATTTTTGTCTTGGGCTGCCGAACCCGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTACTATCATTGGCATTACTTCAAGCTGCATATTACCGTCGCCTACGGTGGTCTGTTCTTAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 1305 0.4368 MVVNCGVECSIQLLEPLQGLTIANEVTQNLEDSTPNSKKHPQPTWNTEQNLVLLSGWIKFSTNSVVGRNQKREMYWGNIAEYCNEHCKFDLPRDDYFSVSLLLLHLLFYSFFLRSSFSIALPFLWIEMAGGVIQQLLRRKLQSHSPNPLSMSSIITKNDGAGSTSSGSLRALALIGAGVSGLLSFATTASADEAEHGLAAPSYPWPHEGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEAEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYPNEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03041 434 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 133 434 - -
Tsu03g03041 434 SUPERFAMILY Cytochrome c 198 388 IPR036909 GO:0009055|GO:0020037
Tsu03g03041 434 PANTHER CYTOCHROME C1 133 434 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 ProSiteProfiles Cytochrome c family profile. 217 324 IPR009056 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 301 325 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 389 404 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 370 389 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 350 369 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 339 350 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 223 242 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 268 288 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 PRINTS Cytochrome C1 signature 203 222 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 389 433 IPR021157 -
Tsu03g03041 434 Pfam Cytochrome C1 family 205 421 IPR002326 GO:0009055|GO:0020037
Tsu03g03041 434 Gene3D - 194 389 IPR036909 GO:0009055|GO:0020037
Tsu03g03041 434 Gene3D - 390 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03041 Tsu-Chr3 41708738 41736381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03041 128 434 Chloroplast and Mitochondria Gene Families AT3G27240 85.016 4.81e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03041 K00413 - gmx:100803087 561.607