Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03033 ATGAGGTactttcattttcatcttttgGTTCTTTCATGGTGTTTGTTATTCATCTCAAATAGTCATGAGCTAGAACAAGATCAAACACAAGCTTTGTTACAATTAAGAACTTATTTAGAAAACCCTTCTTCATTACAAATtatggaaaattacattaaTGACCTTTGTTACCTTCCTTTATCTTCAAATTTTAGCATTAAATGTGAAGATAATTCAATAATTGAGCTCAAAATATTTGGTGACAAATCTATGAAACCATTAAGTTTCAATGGATTTGCAATTCCAAATCAAACACTATCCAAAAATTTCTCAATTGATTCATTTTTCACCACATTGACAAAGTTGAAAACCCTAAAAGTTCTAACTTTAGTTTCATTAGGGATTTGGGGGAAACTTCCTAATCAAATTCATTCTCTCACTTTGCTTCAAGTTTTGGATTTAAGCTCAAATTTCCTATTTGGTACCATTCCACCAAAAATTTCAACAATGGTTAAGCTTCAATCACTTACACTTGATGAAAATTATTTCAACACAACTATGCCTAATTGGTTTGATTCTTTGTTTAATCTAAGTATCttgagtttgaaaaaaaatcacttaaaggGTTCATTTCCATTTTCACTATGCAAAATCAAGAAACTTGAAGTTATTTCTTTCTCACAAAATGAACTCTCTGGTGAATTACATTCTCTCAATACTCTCAATGGTTTACATGTTTTGGATTTGAGAGAAAATCGTTTCGAATTTGAACTACCGGTTCTACCGAAATTCGTGGTCACGGTTTTGTTAAGCAATAACTCGTTTTCGGGAGAGATACCGAAGAAGTTCGGCGAATTGAATCATCTTCAACATTTAGACCTTTCGTCAAATCGTCTTAAGGGAACACCGCCTTCAACATTgttctctttgtcaaatttaaGTTATTTGAATCTAGCTAACAATGTGCTAAGTGGAGAATTTTCTGATAAACTTCATTGTGGCGGAAAACTTGGTTATGTTGATATTTCTAGCAACAAGTTAAGTGGTTTACTTCCTTTTTGTTTGGTGAATAGTTCTAATGGTAGAGTTGTTAGATATGCTAGAAATTGTTTATCTTTTGAGTATAAGAATCAACAAAGAGGTTCTTATTGTAAGGAATCAGGTTTAATATGGAAGAAATTCAAGGAATGGGAAGTGATTGTATTAGGGGCTATGATTGTTGGATTTGTTCTTTTGGTTTTGGTGTTTGGAGTTTTGTTATGTAAGAAATGTGATTTCAGAAAGAAAAGTAGACATGATCTGTTGCCAAATTTTGTTCAAGATAAGTCTACGGCCGGTGTATCGTCAGAAGTTCTTGCAAATGCAAGATTTATTTCACAAGCAGTGAAGCTAGGGACACAAAATACTCCAACCTGTCGACAATTTTCGATTCAAGAGTTGAAGGAAGCCACCAAAAACTTTAGTTTGTCAACTTGTATTGGTGATGGCTCCATAGGGAAGCTATATAAAGGTAAACTAGAGAATGAATGTTACGTGATGATAAGATCGTTGGTTTTGTCAAAGAAATGTTCAATTCAAAATCTTAAAGCTAAGTTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGTCTTTTGGGTCATTGCATTGATGGTGGTGTACAAGATGATTCAAGCACCCAAAAACTTCATCTTGTATATGAATATGTGCCAAATGGTGATTATCATACTCATCTATCAGAATATTCGGCAGAGAAAGCACTTAAATGGCCTGATAGACTGGCGATTTTGATCGGAGTTGCAAAGGCAGTTCATTTCTTACATACAGGTGTTATACCAGGATGTTTTAGCAATCAATTGAAGACAAAGAGTGTGTTACTTGATGAACACTGTATTCCAAAACTAAGTGACTATGGTATGTCCATCATCAAAGAAGATATCGAAAAGTTTGAGACAAAGGGTgagaagaaatcaaaatcatGtgAAAGGACAAAACTGGATAATGATGTTTACAATTTTGGATTCATAATGTTGGAATCACTTGTTGGACCTATTACATGTGATAAAGGTGAATCATTTTTCCTAAATGAAAAGGCATCTTTTGGAAGTCAAGATGGAAGAAGAAAGATTGTGGATCCAATAGTGTTGACAACTTGTTCTCAAGAATCATTATCAATTGCAATATCTATAACAACCAAATGTATATCTCAAGATTCTTCATCTCTTCCTTCTTTTGAAGATGTTTTATGGAACTTACAATATGCTGCTCAAGTTCAAGCCACAGCAGATGCAGATCAAAAATCAGAttaa 2292 0.322 MRYFHFHLLVLSWCLLFISNSHELEQDQTQALLQLRTYLENPSSLQIMENYINDLCYLPLSSNFSIKCEDNSIIELKIFGDKSMKPLSFNGFAIPNQTLSKNFSIDSFFTTLTKLKTLKVLTLVSLGIWGKLPNQIHSLTLLQVLDLSSNFLFGTIPPKISTMVKLQSLTLDENYFNTTMPNWFDSLFNLSILSLKKNHLKGSFPFSLCKIKKLEVISFSQNELSGELHSLNTLNGLHVLDLRENRFEFELPVLPKFVVTVLLSNNSFSGEIPKKFGELNHLQHLDLSSNRLKGTPPSTLFSLSNLSYLNLANNVLSGEFSDKLHCGGKLGYVDISSNKLSGLLPFCLVNSSNGRVVRYARNCLSFEYKNQQRGSYCKESGLIWKKFKEWEVIVLGAMIVGFVLLVLVFGVLLCKKCDFRKKSRHDLLPNFVQDKSTAGVSSEVLANARFISQAVKLGTQNTPTCRQFSIQELKEATKNFSLSTCIGDGSIGKLYKGKLENECYVMIRSLVLSKKCSIQNLKAKLDLLSKLQHPNLVSLLGHCIDGGVQDDSSTQKLHLVYEYVPNGDYHTHLSEYSAEKALKWPDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKSVLLDEHCIPKLSDYGMSIIKEDIEKFETKGEKKSKSCERTKLDNDVYNFGFIMLESLVGPITCDKGESFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISQDSSSLPSFEDVLWNLQYAAQVQATADADQKSD 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03033 763 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 763 - -
Tsu03g03033 763 PRINTS Leucine-rich repeat signature 282 295 - -
Tsu03g03033 763 PRINTS Leucine-rich repeat signature 303 316 - -
Tsu03g03033 763 SMART LRR_typ_2 279 302 IPR003591 -
Tsu03g03033 763 SMART LRR_typ_2 139 163 IPR003591 -
Tsu03g03033 763 Gene3D Ribonuclease Inhibitor 258 384 IPR032675 -
Tsu03g03033 763 Pfam Leucine rich repeat 260 316 IPR001611 GO:0005515
Tsu03g03033 763 ProSiteProfiles Protein kinase domain profile. 480 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g03033 763 ProSiteProfiles Leucine-rich repeat profile. 281 302 IPR001611 GO:0005515
Tsu03g03033 763 Gene3D Transferase(Phosphotransferase) domain 1 564 763 - -
Tsu03g03033 763 Gene3D Phosphorylase Kinase; domain 1 452 563 - -
Tsu03g03033 763 Gene3D Ribonuclease Inhibitor 25 257 IPR032675 -
Tsu03g03033 763 PANTHER OS07G0166700 PROTEIN 2 763 IPR045272 GO:0004714|GO:0006468
Tsu03g03033 763 Pfam Protein tyrosine and serine/threonine kinase 482 673 IPR001245 GO:0004672|GO:0006468
Tsu03g03033 763 SUPERFAMILY Protein kinase-like (PK-like) 461 746 IPR011009 -
Tsu03g03033 763 SUPERFAMILY L domain-like 81 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03033 Tsu-Chr3 41609861 41614392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03033 8 691 Miscellaneous Gene Families AT5G14210 53.890 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tsu03g03033 PK_Tyr_Ser-Thr 7.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03033 - - gmx:100799183 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03033 03 41609861 41614392 Tsu03g03033 03 41609861 41614392 ECH