Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03021 ATGTCTTTGTCTCGAACATGCTCATTGTGCGGCCACAACGGCCACAATTCTCAAACATGCAACGAAGGAGGAGAAAAAAGCATCATGCTTTTTGGCGTTCGACTCACCCAAGGAACCAACAATAGCAACAACAACCTCTCTCAAGTTTCCACCTCCATTGATGCTAGTAATGTCTCTGACATTAATGACTCGGGATCCCGCGAATGCAAACGAGTTAATGAAGGTAATTGGACCGAGGAAGAACACATGAGGTTTTTGAAAGGGTTGAAACATACTCATAATAAAGGTAAGTGGAAAGAAATTTCTACAAATTTTGTAAAAACTCGCACACCAACTCAGGTTGCAAGTCATGCTCAAAAGCATTTTCTCTTGCATTTGAACAAGAACCGCCGCCGTAACGGAAAATCCAGCGTCTTTGATCTTACCATTGATacgGAGGTAGAATCTTCAACTATTATGGAAGATGAGCAAATTCCTCAAGGAACTGAGGTGCCCCTACCTCAACCAATCCCCACCACATATCCATCCGCACACAATGGTGGCAGTCCCACTGGCAACCCTTTACCGGTCGGTCTTGATCCAATAGCATTGCCAGTGTGGCCTCTTTCTTGTGTTGACTTGAATGACAATGGATCGTCTTCTTCTGCTGAGCCTTTTTCATTGTCATTGAAGCTGCAATCTTTGCCTCCATCGGACGATCATTCACTGAAAACTAGCTGTCATTCGTCTCCATTGGCTTTATCGTCGGCTTTTAATTCTAGTAGTGGAAGTGGggataatataatataa 789 0.4297 MSLSRTCSLCGHNGHNSQTCNEGGEKSIMLFGVRLTQGTNNSNNNLSQVSTSIDASNVSDINDSGSRECKRVNEGNWTEEEHMRFLKGLKHTHNKGKWKEISTNFVKTRTPTQVASHAQKHFLLHLNKNRRRNGKSSVFDLTIDTEVESSTIMEDEQIPQGTEVPLPQPIPTTYPSAHNGGSPTGNPLPVGLDPIALPVWPLSCVDLNDNGSSSSAEPFSLSLKLQSLPPSDDHSLKTSCHSSPLALSSAFNSSSGSGDNII 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03021 262 PANTHER TRANSCRIPTION FACTOR KUA1 4 157 - -
Tsu03g03021 262 PANTHER TRANSCRIPTION FACTOR KUA1 4 157 - -
Tsu03g03021 262 MobiDBLite consensus disorder prediction 152 189 - -
Tsu03g03021 262 Pfam Myb-like DNA-binding domain 75 121 IPR001005 -
Tsu03g03021 262 ProSiteProfiles Myb-like domain profile. 69 122 IPR001005 -
Tsu03g03021 262 SMART sant 73 124 IPR001005 -
Tsu03g03021 262 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 76 123 IPR006447 GO:0003677
Tsu03g03021 262 Gene3D - 76 124 - -
Tsu03g03021 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 126 IPR017930 -
Tsu03g03021 262 SUPERFAMILY Homeodomain-like 73 124 IPR009057 -
Tsu03g03021 262 CDD SANT 76 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03021 Tsu-Chr3 41483732 41485821 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu03g03021 Myb_DNA-binding 7.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03021 - - mtr:MTR_5g037080 245.358