Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02984 ATGCTACCGACAATTCTGCGCTGTGCGTCCGATTTCCATGACTTTACGACCTTCGTTTTGAAACATCATGAAGGcacttttcattttgaaggtCCCTGGTTCACAAACACAAGTTTTGTTGGTACCTCTGATCCAAAGAATATCGATCATGTCACAAACAAGAATTTTAGCAACTATGGGAAAGGATCTAACTTCAAAGAAATTCTTGATGTTCTTGGAGGTAGTATTTTAAATTCTGATTTCCATGAATGGAAACAAGAGAGGATAGTGAAtcaattaattttcaaaaggaAAAATTTTCAGAACTTCTTTCACCAATCAGTTCAGAAGAAGGTGAAGAACTGCCTACTACCATTTCTTAACGATGTATCCGAAACCGGAGCTCGGTTGGACTTGCAAGATGTCTTAAATAGGTTCACTTTTGACATAACCTGCAATATTGCCTTTGGATTTGATCCTGATTGTCTTTCAAACAAGTTTAATGAGCTTAGAGATATTGCTTATCTAAAATCTCTACCTGTGATGGAGGAAGTAATATTTTACAGACACCTCATTCCGATTTATTTCCGGAAGCTGCAGAAATGGCTCAATGTTGGTCAAGAGAAGAAGTTCAAGGTAGCCCAAGAAAATATTGACCGGTTCTTATACGAATGTATGAGTACATATTCCAGCAGACACGGTGAAGAAATGGATGAATGTTATTTTGACTTGGTAAAAGAACTGACTAAAGAAGGTTATGGAAGAGGGGAAATGAATGAGAAGTATGTGAGAGACACCGCGCTCTCTTTAATGATAGCAGGAAATGGCACAATTAGTTCAGGTCTCAGTTGGTTTTTTTGGCTTGTTTCAACTCATCCCGTTGTACAAGCCAAAATTATTGACGAGATCAAAGAGAAGTGTCTCACTCGATATGAGAATTGTATTGCTTCGAGGGAAGAGGATCTTGACAAGCTAGTTTATCTCCATGCAGCATTATGTGAAGCGTTGAGGCTTTATCCTCCTATACCTTTTGAGGAAATTTGTTCTGTAAAATCGGATATATTACCTAGCGGAGACCATGTTAGTCAAAATACAATGGTAATGTACTCTATGTATGCTATGGGAAGGATGGAACAAATACGGGGAGAAGATTGCATGGAATTTAAGCCTGAGAGATGGATATCAGATAAAGGATACATTATACATGTTCCGTCTTACAAGTTTTTAACTTTCAATACAGGTCCTAGAAGTTGTTTAGGTAAAGATCTTAGCTTTGTTCAAATGAAGATGGTTGCAGCTGCTATATTATGGAAGTTTCAAATCCAGGTTGTGGAAGGTCACCCTGTAATGCCAAGAATTTCTATCATTCTTCGTATGAAACATGGCTTGAAGGTTGAGGTCACTAAAAGAGGCATTTGA 1398 0.3712 MLPTILRCASDFHDFTTFVLKHHEGTFHFEGPWFTNTSFVGTSDPKNIDHVTNKNFSNYGKGSNFKEILDVLGGSILNSDFHEWKQERIVNQLIFKRKNFQNFFHQSVQKKVKNCLLPFLNDVSETGARLDLQDVLNRFTFDITCNIAFGFDPDCLSNKFNELRDIAYLKSLPVMEEVIFYRHLIPIYFRKLQKWLNVGQEKKFKVAQENIDRFLYECMSTYSSRHGEEMDECYFDLVKELTKEGYGRGEMNEKYVRDTALSLMIAGNGTISSGLSWFFWLVSTHPVVQAKIIDEIKEKCLTRYENCIASREEDLDKLVYLHAALCEALRLYPPIPFEEICSVKSDILPSGDHVSQNTMVMYSMYAMGRMEQIRGEDCMEFKPERWISDKGYIIHVPSYKFLTFNTGPRSCLGKDLSFVQMKMVAAAILWKFQIQVVEGHPVMPRISIILRMKHGLKVEVTKRGI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02984 465 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS E-class P450 group I signature 322 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Tsu03g02984 465 Pfam Cytochrome P450 29 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PANTHER CYTOCHROME P450 8 460 - -
Tsu03g02984 465 SUPERFAMILY Cytochrome P450 10 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 Gene3D Cytochrome P450 7 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02984 465 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02984 Tsu-Chr3 40912492 40913889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02984 1 464 Cytochrome P450 AT2G23180 42.647 1.01e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02984 - - mtr:MTR_1g035760 625.55