Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02983 ATGCTACCGACAATTCTGCGTAATGTGTCCAATTTCCATGAATTTATGACCTTAGTTTTGAAACATCATGGAGgaacttttcattttgaaggtCCAATGTTCACAAACACAAGTTTTGTTGGTACCTCTGATCCAAAGAACATTGATCACAtcacaaacacaaattttgGAAACTACGGAAGAGGAACTAACTTCAAAGAAATTTTTGATGTTCTTGGAGTTAGTATTTTAAATTCTGATTTCCATGAATGGAAACAAGAGAGGATAGTGAAtcaattaattttcaaaaggaAAAGCTTCAAGAAATTCTCCCACCAATCAGTTCAGAAGAAGGTGGAGAACTGCCTTTTACCATTTCTTAACGATGTATCCGAAGCCGGAGCTCAGGTGGACTTGCAAGATGTCTTTAGTAGGCTCACCTTTGACACCACCTGCACCCTGTCATTTGGATTTGATCCTAATTGTCTTTCAAACAAGTTTAACGAGCTTCGAGAATTTGCTTATCTAAAATCTCTTCCTGTGATGGAGGAAGTAGCATTTTACAGGCACTTCATTCCAAGTTATTTACGGAAGCTGCAGAAATGGCTCAACGTTGGTCAAGAGAAGAAGTTCAAGGTAGCTCAAGAAGATATGGACCGGTTCTTGTACGAATGTATGAGTACATATTCAAGCAGAAGTAGTGAAGAAATGGACGAATGTTATTTCGACTTGGTAAAAGAATTGACGAAAGAAGGATATGGAAGGGGGGAAATGAGTGAGAAGTATGTGAGAGACACTGGACTCACTCTTCTGTTAGCAGGAAGTGCCACAATTAGTACAACTCTCAGTTGGTTTTTTTGGCTTGTTTCAACTAATCCCGTTGTGCAAGCCAAAATTATTCAAGAGATCAAAGAGAATTGTCTCACTCAATATGAAAATGGTATTGCTTCAAGGGAAGATGATCTTGACAAGCTAGTTTACCTCCATGGAGCATTATGCGAAGCATTGAGGCTTCACCCTCCAATACCATTTGAGCATATGTGTTCTGTCAAATCGGATATATTACCGAGCGGAGACCATGTTAGTCAAAATACAATGGTAATGTACTCTATGCATGCTATGGGAAGGATGGAAGAAATATGGGGTGAAGATTACAATGAATTTAAGCCTGAGAGATGGATATCAGATAAAGGAGACATTATACATGTTCCATCTTACAAGTTCATAGCTTTTAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATATTAGCTTCGTCCAAATGAAGATGGTTGCAGCTGCTATATTATGGAAGTTTCACATACAATTGGTAGAAGGTCACCCTGTAATGCCAAGAATTTCTGTTATTCATCGCATGAAACATGGCTTGAAGGTTCAAGTTACTAAAAGAGGCATTTGA 1398 0.372 MLPTILRNVSNFHEFMTLVLKHHGGTFHFEGPMFTNTSFVGTSDPKNIDHITNTNFGNYGRGTNFKEIFDVLGVSILNSDFHEWKQERIVNQLIFKRKSFKKFSHQSVQKKVENCLLPFLNDVSEAGAQVDLQDVFSRLTFDTTCTLSFGFDPNCLSNKFNELREFAYLKSLPVMEEVAFYRHFIPSYLRKLQKWLNVGQEKKFKVAQEDMDRFLYECMSTYSSRSSEEMDECYFDLVKELTKEGYGRGEMSEKYVRDTGLTLLLAGSATISTTLSWFFWLVSTNPVVQAKIIQEIKENCLTQYENGIASREDDLDKLVYLHGALCEALRLHPPIPFEHMCSVKSDILPSGDHVSQNTMVMYSMHAMGRMEEIWGEDYNEFKPERWISDKGDIIHVPSYKFIAFNTGPRSCLGKDISFVQMKMVAAAILWKFHIQLVEGHPVMPRISVIHRMKHGLKVQVTKRGI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02983 465 PANTHER CYTOCHROME P450 5 460 - -
Tsu03g02983 465 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 460 - -
Tsu03g02983 465 Gene3D Cytochrome P450 4 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 SUPERFAMILY Cytochrome P450 4 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Tsu03g02983 465 Pfam Cytochrome P450 10 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02983 465 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02983 Tsu-Chr3 40908097 40909494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02983 1 464 Cytochrome P450 AT2G23180 42.316 1.83e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02983 - - mtr:MTR_1g035760 617.076