Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02980 ATGATACAGtactgtaatgttgttgtaggATTTGTAGccatcttcatcctcttcttCATATACATCTACTATTGGAGAAGCAATAGAGATGAAATTGTTTCGAATTGGCAAATAATTCGCATGCTACCGACAATTCTGCGGAATGTGTCCGATTTCCATGAATTTACGACCTTAGTTTTGAAACATCATGGAGgaacttttcattttgaaggtCCAATGTTCACAAACACAAGTTTTGTTGGTACCTCTGATCCAAAGAACATTGATCACAtcacaaacacaaattttgGAAACTACGGAAGAGGATCTAACTTCAAAGAAATTTTTGATGTTCTTGGAGCTAGTATTTTAAATTCTGATTTCCATGAATGGAAACAAGAGAGGATAGTGAAtcaattaattttcaaaaggaAAAGCTTCAAGAAATTCTCCCACCAATCAGTTCAGAAGAAGGTGGAGAACTGCCTTTTACCATTTCTTAACGATGTATCCGAAGCCGAAGCTCAGGTGGACTTGCAAGATGTCTTTAGTAGGCTCACCTTTGACACCACCTGCACCATGTCATTTGGATTTGATCCTAATTGTCTTCCAAACAAATTTAGTCAGCTTAGAGAAGTTGCTTCTCTAAAATCTCTTCCTGTGATGGAGGAAGTAACATTTTACAGGCACTTCGTTCCAAGTTATTTACGGAAGCTGCAGAAATGGCTCAACGTTGGTCAAGAGAAGAAGCTCAAGGTAGCTCAAGAAAGTATGGACCGGTTCTTGTACGAATGTATGAGTACATATTCAAGCAGATGTAGTGAAGAAATGGACGAATGTTATTTCGACTTGGTAAAAGAATTGACGAAAGAAGGTTATGGAAGGGGGGAAATGAGTGAGAAGTATCTGAGAGACACTGGACTCGCTCTTCTGTTAGCAGGAAGTGCCACAATTAGTACAACTCTCAGTTGGTTTTTTTGGCTTGTTTCAACTAATCCCGTTGTGCAAGCCAAAATTATTCAAGAGATCAAAGAGAATTGTCTCACTCAATATGAAAATGGTATTGCTTCAAGGGAAGATGATCTTGACAAGCTAGTTTACCTCCATGGAGCTTTATGCGAAGCGTTGAGGCTTCACCCTCCGATACCTTTTGAGCATATGTGTTCTGTTAAATCTGATATACTACCTAGCGGAGACCGTGTTAGTCAAAATACAATGTTAATGTACTCTATGTATGCGATGGGAAGGATGGAACAAATATGGGGAGAAGATTGCATTGAATTTAAGCCTGAGAGATGGATATCGGATAAAGGAGACATTATACATGTTCCATCTTACAAGTTCATAGCTTTCAATACAGGTCCTAGAAGTTGTTTGGGTAAAGATATTAGCTTCGTCCAAATGAAGATGATTGCAGCTGCTATATTATGGAAGTTTCACATACAATTGGTAGAAGGTCACCCTGTAATGCCAAGAATTTCTGTTATTCATCGCATGAAACATGGCTTGAAGGTTGAAGTCGCTAAAAGAGGCATTTGA 1518 0.3656 MIQYCNVVVGFVAIFILFFIYIYYWRSNRDEIVSNWQIIRMLPTILRNVSDFHEFTTLVLKHHGGTFHFEGPMFTNTSFVGTSDPKNIDHITNTNFGNYGRGSNFKEIFDVLGASILNSDFHEWKQERIVNQLIFKRKSFKKFSHQSVQKKVENCLLPFLNDVSEAEAQVDLQDVFSRLTFDTTCTMSFGFDPNCLPNKFSQLREVASLKSLPVMEEVTFYRHFVPSYLRKLQKWLNVGQEKKLKVAQESMDRFLYECMSTYSSRCSEEMDECYFDLVKELTKEGYGRGEMSEKYLRDTGLALLLAGSATISTTLSWFFWLVSTNPVVQAKIIQEIKENCLTQYENGIASREDDLDKLVYLHGALCEALRLHPPIPFEHMCSVKSDILPSGDRVSQNTMLMYSMYAMGRMEQIWGEDCIEFKPERWISDKGDIIHVPSYKFIAFNTGPRSCLGKDISFVQMKMIAAAILWKFHIQLVEGHPVMPRISVIHRMKHGLKVEVAKRGI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02980 505 PANTHER CYTOCHROME P450 18 500 - -
Tsu03g02980 505 Gene3D Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 500 - -
Tsu03g02980 505 Pfam Cytochrome P450 52 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 SUPERFAMILY Cytochrome P450 22 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu03g02980 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02980 Tsu-Chr3 40853659 40855363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02980 12 504 Cytochrome P450 AT2G23180 40.945 6.77e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02980 - - mtr:MTR_1g035760 652.514