Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02958 ATGGGGTCTCAAGGTGGAACAATTGAAGAGTCTAGGACTACACTTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTACAAAACCATCTTGGGAATTTAGGTAAGCCACTTGGAAGTATGAATCTTGATGAGTTGCTTAAGAGTGTGTGGAGTGTTGAAGCCGGTGAAGTTTCTGATTTCGGTAACGATGTTGCTGGTACTACTACTAACATGCAGCATAATCAACTTGGTGAGATTAATCGACAGGGAAGTTTAACATTATCTGGAGATCTTAGTAAGAAAACTGTTGATGAGGTGTGGAAAGATATGCAAGTAAAGAAGAAGAGGAGTGTTGATAAGGATCGGAAAGCGCGTGACAGACAACAAACACTTGGTGAGATGACTTTGGAGGATTTCTTGGTGAAAGCTGGAGTTGTTGGTGAATCTTTTCATAATAAGGAAGGTGATTTGTTAAGGGTTGATTCGAATGAGGATTCTCGGCAAAATGTTTCACAACACGGTCACCATTGGATGCAATTTCAGCTTCCTTCAGTACAACAGCAGCAACAGCATCAACAAGAAAAACATATGATGCCGGGATTTGTGGCTGTTCATGCCATTCAACAGCCTTTTCAGGTTGCAGGGCAAGTTTTGGATGCGGCAATCTCACCGTCTTCTTTAATGGGTACATTATCAGATACACAAACACTAGGTCGAAAAAGGGTTGCCTCTGGAATAGTCGTAGAGAAAACTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGGTCACGAGCAAGAAGACAGGCTTACACACAAGAACTGGAACTTAAAGTTTCGCGTTTGGAAGAGGAAAATGAAAGGCTTAGGAAACAGAATGAGATAGAGAAAGAGGTTCCATGTGCGCTGCCACCCGAGCCTAAGAATCAACTCCGCAGAACTAATTCGGCATCCTTTTGA 966 0.4213 MGSQGGTIEESRTTLLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGNDVAGTTTNMQHNQLGEINRQGSLTLSGDLSKKTVDEVWKDMQVKKKRSVDKDRKARDRQQTLGEMTLEDFLVKAGVVGESFHNKEGDLLRVDSNEDSRQNVSQHGHHWMQFQLPSVQQQQQHQQEKHMMPGFVAVHAIQQPFQVAGQVLDAAISPSSLMGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRKQNEIEKEVPCALPPEPKNQLRRTNSASF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02958 321 Coils Coil 270 301 - -
Tsu03g02958 321 PANTHER BZIP TRANSCRIPTION FACTOR 2 319 - -
Tsu03g02958 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Tsu03g02958 321 SUPERFAMILY Leucine zipper domain 251 300 IPR046347 GO:0003700|GO:0006355
Tsu03g02958 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Tsu03g02958 321 Gene3D - 249 302 - -
Tsu03g02958 321 SMART brlzneu 247 315 IPR004827 GO:0003700|GO:0006355
Tsu03g02958 321 MobiDBLite consensus disorder prediction 294 321 - -
Tsu03g02958 321 Pfam bZIP transcription factor 251 296 IPR004827 GO:0003700|GO:0006355
Tsu03g02958 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 319 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02958 Tsu-Chr3 40474001 40477295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02958 1 321 bZIP Transcription Factor Family AT3G56850 57.362 7.09e-107 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu03g02958 bZIP_1 1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02958 K14432 - gmx:100170741 360.533