Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02957 atgcAGTGGATTATGCCTAGCGAGGCAGGTTATATCGAGACTGAAGGCATAGAAAAGACTGACACGATCAAGCAAGAGGCAATAGCCCGTGAAGTAGATATCTCAAGCTTAAGGAATCAATATGATATTACTTTACGAGATTATGGATATGCTCTTCCAGACCTACTGGCTTACTCGATGCGAAAAATGATGGCAGATAAAGCTTTGGTGAGGAGACTTTCTTCTTATGAGACAATGGGCTCTGCGATAACCATATGCAGTGATAAGACTGGCACATCGACTATGAATCAGGGTGCTAATGATGTTGAGGTTTCTGGATCACGCAACAGAATGGCAAGTTTACATTGGGGAATTAAGGTTGGGATGAATTTTGTGACTGATCGGTCAGAATCATTCAAAAGTGGCAACAGTGACTCTTTGTTTTAG 426 0.4131 MQWIMPSEAGYIETEGIEKTDTIKQEAIAREVDISSLRNQYDITLRDYGYALPDLLAYSMRKMMADKALVRRLSSYETMGSAITICSDKTGTSTMNQGANDVEVSGSRNRMASLHWGIKVGMNFVTDRSESFKSGNSDSLF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02957 141 Gene3D - 51 100 - -
Tsu03g02957 141 PANTHER CATION TRANSPORTING ATPASE 99 131 - -
Tsu03g02957 141 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 80 IPR023298 -
Tsu03g02957 141 PANTHER CATION TRANSPORTING ATPASE 55 97 - -
Tsu03g02957 141 PANTHER CALCIUM-TRANSPORTING ATPASE 55 97 - -
Tsu03g02957 141 PANTHER CALCIUM-TRANSPORTING ATPASE 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02957 Tsu-Chr3 40440553 40441913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02957 56 131 Primary Pumps ATPases AT5G57110 47.458 7.28e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02957 K01537 - gmx:100792945 98.9821