Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02923 ATGGAagatcaacaacaaaaacatgttGAGTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAGGAGTGAAATTGTGAGATCAAGATGGACACCAAAACCTGAACAAATCCTTATACTTGAATCCATTTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACCGTTAGAATAAGAAAACTTCTTGAAAAATTTGGAGCTGTTGGTGATGCTAATGTTTTCTATTGGTTTCAGAATCGCCGCTCTCGCACTCGCCGCCGTCAAAGGCAGATGCAAGCCGCCGCTCAACTAAGCAGTGGCAGTGCAAATCCATATCACCAATCTCATTGCAGCACCAATAGTGCTAACACTCTGTCTCTTGGTGCCGCAATTGGTTTTGGTGGTAATTCTAATTTCACTATGAATTCTTCATCTTGTAATTCATCGTATAATAAGAATTTTTTGGGTTCTTCTTCATCATGTGGTTTTGGTATAGGTCTGGGCCTTGGTGTTGGTGGTGGCGGTAGCGGTGGCAGAGACGTAGGGTTTGATGGTTTGTTCTTAGGATTTGGGGGGAGTGATGTTTCAGATGTGATTATAGTGTTCATCAATGGGGTTCCAACAGAAGTTCTGAGGGGTGCAATTAACATGAAAACAATGTTTGGTGAAGATGTTATGTTAATTCATTCATCTGGAGTCTCAGTTCCAACCAATGAGTTTGGTTTCTTGATGCAAAGCTTGCAACATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAACTCAAGCATGA 777 0.3977 MEDQQQKHVESQSSNTNNPNNTERSEIVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRTRRRQRQMQAAAQLSSGSANPYHQSHCSTNSANTLSLGAAIGFGGNSNFTMNSSSCNSSYNKNFLGSSSSCGFGIGLGLGVGGGGSGGRDVGFDGLFLGFGGSDVSDVIIVFINGVPTEVLRGAINMKTMFGEDVMLIHSSGVSVPTNEFGFLMQSLQHGESYFLVSKQTQA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02923 258 MobiDBLite consensus disorder prediction 1 30 - -
Tsu03g02923 258 SUPERFAMILY Homeodomain-like 24 97 IPR009057 -
Tsu03g02923 258 MobiDBLite consensus disorder prediction 94 113 - -
Tsu03g02923 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 159 - -
Tsu03g02923 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 192 255 - -
Tsu03g02923 258 Pfam Homeodomain 29 89 IPR001356 GO:0003677
Tsu03g02923 258 MobiDBLite consensus disorder prediction 8 27 - -
Tsu03g02923 258 SMART HOX_1 27 94 IPR001356 GO:0003677
Tsu03g02923 258 ProSiteProfiles 'Homeobox' domain profile. 25 90 IPR001356 GO:0003677
Tsu03g02923 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 159 IPR044558 GO:0003700|GO:0048830
Tsu03g02923 258 PANTHER WUSCHEL-RELATED HOMEOBOX 11 192 255 IPR044558 GO:0003700|GO:0048830
Tsu03g02923 258 Gene3D - 28 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02923 Tsu-Chr3 39467214 39469557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02923 12 256 Wox Gene Family AT5G17810 46.996 5.80e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu03g02923 Homeodomain 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02923 - - lang:109335690 239.965