Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02921 ATGGAAGATCAAGAACAAAAGCAATATGTTGAGTCTCaaagttccaatacaaataaTCCAAACAACACTGAAAAGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATCCTTATACTTGAATCCATTTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACCGTTAGAATAAGAAAACTTCTTGAAAAATTTGGTGCTGTTGGTGACGCTAATGTTTTTTATTGGTTTCAGAATCGCCGTTCTCGCTCTCGTCGCCGTCAAAGGCAGATGCAGGCTGCCGCTCAACTAAGCGGTGGCAGTGCAAATCCATATCACCAATACGACTGCAGCACCAACGGCGGTGCTAACACTCTGTCTCTTGGTGCTGCAGTTGGTTTTGGTGATTCCTCTAATTTCACCTTGAACTCTTCTTCTTGTAATTCAtcttataataataactttTCCGGTTCTTCTTCATCATGTGGTCTTGGAGTTGGTCTCGGTGTCGGTGTTGGCGGTGGCGGAGAAGAAGGGTTTGGTGGTTTGTTCTTAGGTTCAACTCCAGTTAATTTTCATGAAACTGATCATACCTCAGCTGCTTCATCAGTTTTGTACCCTTCTAATCATGCTTCAAATTTCAACTTCCATTCAGGATTTGGGGGGAGCAATGTTTCAAGTTTGATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGGGGTGCAATTGACATGAAAGCAATGTTTGGTGAAGATGTTATGCTAGTTCATTCTTCTGGAGTTTCAGTTTCAACCAATGAGTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTATCTGGTTTCAAAGCAACCCCAAGCATGA 870 0.4069 MEDQEQKQYVESQSSNTNNPNNTEKSETVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLSGGSANPYHQYDCSTNGGANTLSLGAAVGFGDSSNFTLNSSSCNSSYNNNFSGSSSSCGLGVGLGVGVGGGGEEGFGGLFLGSTPVNFHETDHTSAASSVLYPSNHASNFNFHSGFGGSNVSSLITVFINGVATEVPRGAIDMKAMFGEDVMLVHSSGVSVSTNEFGFLMQSLQHGESYYLVSKQPQA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02921 289 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 286 IPR044558 GO:0003700|GO:0048830
Tsu03g02921 289 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 286 - -
Tsu03g02921 289 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Tsu03g02921 289 SMART HOX_1 28 95 IPR001356 GO:0003677
Tsu03g02921 289 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g02921 289 Gene3D - 30 97 - -
Tsu03g02921 289 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Tsu03g02921 289 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Tsu03g02921 289 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02921 Tsu-Chr3 39415243 39418894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02921 13 286 Wox Gene Family AT5G17810 49.310 1.91e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu03g02921 Homeodomain 1.2e-12 CL0123