Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02917 ATGAAGTTCATTGCCATCTTaatgatattcttctttatTGTTCCTTTCTCATTGGCTCAACTAAGGTTTGGCTATTATAGCTTTACATGTCCAATTGCAGAGGAAATTGTAAGTGAGGTTGTGGAAAACTATTACCAAAGTGATGCAACCATTGCTGGTGCCTTGATTCGTTTGCACTATCATGATTGTATTTCCAATGGTTGTGATGCTTCAATACTAATAGATTcaacaaaaaacagaaaatcagAGAAAGAAGCAAGACCAAACCAAACGCTTAGAGGATTTGACCTAATTGACGACATCAAGAGTGCCTTAGAACAAGAATGCCCCGAAACCGTTTCGTGTGCCGATATCATAACAATGGCCACAAGGGAAGCAATTGCATTAGCAAATGGACCAAGATACCATGTCCTAACAGGAAGAAGAGATGGGTTAGTATCAAATGCCTTAAATGTGACAATTCCTGGAACATTACTTAATGTGTCACAAGCTCTAAAAAAATTTACCTCAAAAGGGTTAACATTAGAAGACATGGTGACCCTTATTGGAGCACACACTATTGGTTTTTCTAAATgcaaattttttcaaaataggtTATCAAGTTTTAGATCAGGAAGAATTGACCCTACAATGGATCCTAATTTAAATGCTAATTTGGTTAAAAAATGTGGATCAAGATTTAACCCTGCAGAGAATCATACTTCAGTGTTTTTGGATCAAGAAACAccttttgtttttgacaataaattttacaaacaaattattaataagAGAGGGATACTTAAAATTGATCAACAACTTGCTTTGGATCCTATTTCTAGAGaattggttttgaattttgCAAGTGGTAATTTTAGCTTTTGGAAAAGATTTGGTGTTGCTTGGAGTAAGCTGGGAAGAATTGAAGTCTTGGTTGGGAATGAGGGTGAAATTAGAAGAAATTGCAGGGCTTTCAATAATGATATTTGA 969 0.323 MKFIAILMIFFFIVPFSLAQLRFGYYSFTCPIAEEIVSEVVENYYQSDATIAGALIRLHYHDCISNGCDASILIDSTKNRKSEKEARPNQTLRGFDLIDDIKSALEQECPETVSCADIITMATREAIALANGPRYHVLTGRRDGLVSNALNVTIPGTLLNVSQALKKFTSKGLTLEDMVTLIGAHTIGFSKCKFFQNRLSSFRSGRIDPTMDPNLNANLVKKCGSRFNPAENHTSVFLDQETPFVFDNKFYKQIINKRGILKIDQQLALDPISRELVLNFASGNFSFWKRFGVAWSKLGRIEVLVGNEGEIRRNCRAFNNDI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02917 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Tsu03g02917 322 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 Gene3D Peroxidase, domain 2 155 298 - -
Tsu03g02917 322 SUPERFAMILY Heme-dependent peroxidases 20 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 ProSiteProfiles Plant heme peroxidase family profile. 20 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 CDD secretory_peroxidase 20 318 IPR033905 GO:0004601|GO:0042744
Tsu03g02917 322 Pfam Peroxidase 38 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 Gene3D - 24 319 - -
Tsu03g02917 322 PANTHER PEROXIDASE 44-RELATED 10 317 - -
Tsu03g02917 322 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu03g02917 322 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02917 Tsu-Chr3 39320169 39321857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02917 7 319 Peroxidase AT5G17820 50.637 2.76e-111 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02917 K00430 - csin:114291213 360.918