Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02899 ATGATTATTCACTTCAACACACCAAAAGAATTTGGTGTGGTTGTAAGGAACACTCACTCTACCTTTGATGATGGAAGTGATCACGATGAGCAAGATTGCAATAGATTAGACAACATAGatgatgaaAGGGGTAATGATGGTATTTCAAGTTATGCTAATGATCAATTGAACTTGAATGTGTCTCTTCTAAATGATGTGAAGAAAAGATCCATTGATTGTGTTGAAAATGGTATTGAAGAATATGATTTGAATATGGAGGAAAATTGTTGCCACATGAAATCTTCAATATTTAGAATTTCACTTTGTGTTCTTGAGATGCCACTTTACTTGCCAAGGAGATTAACAATTCCAATTATATGTGAAGAGAAATGGTCAAAGGTATATGCAATTTCTTCAATGATATTAGCACCACTTCTCTTATCTTTTCTATGGAACACTCATATGGGATATAGTATATCAAACACAAATATTATTGTCTATGGAATTGGATTATTGGTTGGAATTATATTTGGTGTAATAGCATTTTTCACAACAGAAATAATAAGTCCTTCAATTTTAGGGTTAACCATTCTTGCTTGGGGTAACTCAATTGGTGATTTGATCACAAATTTAACAATGGCTTTAAATGGTGGACAAGAGGGGGTTCAAATAGCAATTTCAGGTTGCTATGCTGGTCCTATTTTTAATACTCTTGTTGGATTAGGAATTTCTCTTGTAAGTTCTACTTGGTCACAATATCCACAACCTATTGTGATTCCTAAAGATCCATATCTATGGGAGACATTGGTGTTTTTGGTGTTTGGATTGGTTTTTGCACTTTtggttttgttaaaaaaagataTGAAACTAGATGGAGTATTAGGAGGAGGGCTTTTAGTTGTTTActtcatttctttgtttttgagGTTGATTCAAACACAAGGGTCTCTCCAATTTTATGATATGTAA 948 0.3175 MIIHFNTPKEFGVVVRNTHSTFDDGSDHDEQDCNRLDNIDDERGNDGISSYANDQLNLNVSLLNDVKKRSIDCVENGIEEYDLNMEENCCHMKSSIFRISLCVLEMPLYLPRRLTIPIICEEKWSKVYAISSMILAPLLLSFLWNTHMGYSISNTNIIVYGIGLLVGIIFGVIAFFTTEIISPSILGLTILAWGNSIGDLITNLTMALNGGQEGVQIAISGCYAGPIFNTLVGLGISLVSSTWSQYPQPIVIPKDPYLWETLVFLVFGLVFALLVLLKKDMKLDGVLGGGLLVVYFISLFLRLIQTQGSLQFYDM 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02899 315 PANTHER CATION CALCIUM EXCHANGER 40 181 - -
Tsu03g02899 315 Pfam Sodium/calcium exchanger protein 178 302 IPR004837 GO:0016021|GO:0055085
Tsu03g02899 315 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 181 311 - -
Tsu03g02899 315 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 40 181 - -
Tsu03g02899 315 Gene3D - 93 304 IPR044880 -
Tsu03g02899 315 PANTHER CATION CALCIUM EXCHANGER 181 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02899 Tsu-Chr3 39040341 39042002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02899 53 310 Antiporters AT5G17860 41.667 1.13e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02899 K13754 - gmx:100813848 329.331