Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02898 ATGGCACCTTTCATTTTCACCTCTAActccaaaccaaaacaaaaaaaactcactCTTCTTCTCAACACATCCTTCCTCTTCCTCCTATTTTTTTGCCTCAAACTTTATATCAATCCTTCAAATTCCAATTCTCATTTTCATCATGTTTCTTCGAAACTTTTCAACCATGCTAGAATCCTCACTAGTGACATCATAGTTGATTCATGCACTGAACTTCACAAATACTCAAATTACACCTCTAAGTGCTTATATGTCAAAACACATTCTGATTGTAGATCAAAAGGTTACATAAATTATCTTCAAATCTTTTATTGTAACCTTGGAAATTCACCAATTCTTGGTCACACGTTACTTGGTTTATGGCTTGTAGTTTTGTTCTATCTTTTAGCCGACACGGCTTCAAATTACTTTTGCACCTCCCTAGAAGGTTTGTCTAACATCTTAAGACTTTCTCCAACCATAGCTGGTGTAACATTACTCTCTCTTGGTAATGGTGCTCCTGATTTCTTTGCTAGTGTTGTTTCTTTCACAAGTTCAAATAATggcgccgttggtttaaatagCATTTTAGGGGGTGCATTTTTTGTTTCCACATGTGTTTTGGGAGTCATAAGTTTTTTAGTTAGTTCTAAATCTTATGATGTTGAAATCGACAAGGCTAGTTTCATTAGAGATgtcattttcttccttttctcttTGTTCATTCTTCTCATCATCATTGTCATTGGGAAAATTAGCCTTTTTGGTTCAATTTGCTATCTTTCCATCTATTTTCTATATGTTTGTGCCGTCTCAGCCACACATTTCTACTACGAAGTcgataaaaaagaattagttgAATCTTCATCGTCTTTTGATGATTTAGCTGAATCCGGCATACCATTATTAGGCTATGTCGACGATGATACTGATAATGATTCTATTCAGAAACCAATTTTACGAAATGAAGTTGGTATTGGTAATAATGTAGAGacgaaaaaagaagaaattttttctaGCACTTACTACTTGTGGAAGTTTCTAGAAGTACTTGAATTACCACTTTGTTTACCGAGAAAACTAACTATACCTGTTGTGAGTGAAGAAAATTGGTCGAAACCATATGCAGTTTTATCGGTTACCCTAGCGCCGATTTTATTTGCAATTCTTTGTAATACACAAATGGAAAATGTGGATTCAAAGAGTACTTTAGTTGCATATTTAACATCATCATTAATTGGTATTGTTTTTGGAAACATGGCATGTGTGACAACAAAAAGTACAAGACCACCTAGAAGATGTTTGTTTCCTTGGCTAGCTGGTGGATTTTCAATGAGTGTGACATGGACTTATATAATTGCTGAAGAACTTGTTTCACTTTTGATTTCAATTGGATATGTAATTGGTGTTAGTCCTTCAATTTTAGGGTTAACTGTTTTAGCTTGGGGAAATTCTCTAGGAGATTTGATTGCAAATGGTGCTATGGCTAAAAATGGTGGTGTTGATGGCGCACAAATAGCTGTTTCAGGTTGTTATGCTGGTCCTatgtttaatattttgatgGGATTAGGGTTACCTCTTGTTCTTTCAGCTTGGGGTGAATACCCTAATTCTTATGTTGTTCCTAAGGATAGTTCACTTTTGGggacaattttgtttttgatggTAGGGGTACTTTGGTCACTTGTTGTATTGGTTAAGAAGAATATGAGGCTTGATAAGTTTTTAGGGGCTGGTCTCTTGACCATTTACCtttgctttttgtttttaaggttaGCTATGGCTATTGGTGTTCTTAATTAA 1782 0.3215 MAPFIFTSNSKPKQKKLTLLLNTSFLFLLFFCLKLYINPSNSNSHFHHVSSKLFNHARILTSDIIVDSCTELHKYSNYTSKCLYVKTHSDCRSKGYINYLQIFYCNLGNSPILGHTLLGLWLVVLFYLLADTASNYFCTSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTSSNNGAVGLNSILGGAFFVSTCVLGVISFLVSSKSYDVEIDKASFIRDVIFFLFSLFILLIIIVIGKISLFGSICYLSIYFLYVCAVSATHFYYEVDKKELVESSSSFDDLAESGIPLLGYVDDDTDNDSIQKPILRNEVGIGNNVETKKEEIFSSTYYLWKFLEVLELPLCLPRKLTIPVVSEENWSKPYAVLSVTLAPILFAILCNTQMENVDSKSTLVAYLTSSLIGIVFGNMACVTTKSTRPPRRCLFPWLAGGFSMSVTWTYIIAEELVSLLISIGYVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGVDGAQIAVSGCYAGPMFNILMGLGLPLVLSAWGEYPNSYVVPKDSSLLGTILFLMVGVLWSLVVLVKKNMRLDKFLGAGLLTIYLCFLFLRLAMAIGVLN 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02898 593 Gene3D - 150 292 IPR044880 -
Tsu03g02898 593 Gene3D - 356 586 IPR044880 -
Tsu03g02898 593 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 593 - -
Tsu03g02898 593 Pfam Sodium/calcium exchanger protein 120 263 IPR004837 GO:0016021|GO:0055085
Tsu03g02898 593 Pfam Sodium/calcium exchanger protein 432 585 IPR004837 GO:0016021|GO:0055085
Tsu03g02898 593 PANTHER CATION/CALCIUM EXCHANGER 1 8 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02898 Tsu-Chr3 39037854 39039704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02898 67 593 Antiporters AT5G17860 51.705 1.94e-175 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02898 K13754 - gmx:100818583 798.89