Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02885 ATGGCGGGAGCAACACAAGAGGTAGTGGTTACAGTGCCATGTGGGGTTTGCAAGTACTTGAAGAAGTGTACTAGTGAATGTATATTCACACCCTACTTTGATACAGAACAAGGTGCAACTAGCTTTGCAGCTGTGCACAAAGTGTTTGGTGCTAGCAATGTGTCGAAGCTCTTGTCCAATATTTCGATTAACCACCGCCACGAAGCAGCGGTGACTATATCCTATGAGGCTCAGGCTAGGCTATCTGATCCAGTTTATGGTTGTGGCCACCATTCTTGCTTTGCTTGCAGCAGCAGGTTGAGTAAAATAGTAATCTATCTCTATAGTTTTGCATCTTCTATTCACCTCTAA 351 0.4416 MAGATQEVVVTVPCGVCKYLKKCTSECIFTPYFDTEQGATSFAAVHKVFGASNVSKLLSNISINHRHEAAVTISYEAQARLSDPVYGCGHHSCFACSSRLSKIVIYLYSFASSIHL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02885 116 Pfam Lateral organ boundaries (LOB) domain 13 91 IPR004883 -
Tsu03g02885 116 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Tsu03g02885 116 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02885 Tsu-Chr3 38938023 38938373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02885 13 88 AS2 family AT3G03760 74.026 1.57e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu03g02885 LOB 1e-26 No_clan