Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02884 ATGGCTGAGTCACAAAGTGGTGCTGGTAGTTCAGGAAACAGGCGTGGTAAAGGTGCCAATGCTGCAAAGCGTGCAATGGCAGGAGTGACACAAGATGCATCGGCTGTACCCCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGCAGTAGTGGGTGTATCTTTGCACCCTACTTTGGGACTGACCAAGGTGCGGCTAGATTTGCGGCTGTGCACAAGGTGTTTGGTGCCAGCAATGTGTCCAAACTCTTGTCCGGTATTTCGACGAACCACCGCCATGAAGCCGCAGCAACTATTTCCTATGAGGCTCAGGCTAGGCTGTCTGATCCTGTTTATGGTTGTGTGTCCACCATTCTTGCTTTGCAGCAACAGGTGACTGCAATGCAAGCAGAAGTCTCGATGATGCAATCTCAGTTAATGAATCGGAGATATGCATTTGCAAGTGCTATCCAGACCACGCACCAGCAGCAGCATCAGATACTACAGCAACCACCAAACTTCAATGTATCTGTGCAGCCGGAATACTCCAACAACTCATCTGCTTCCACCAATAATTTCATGAACATGAACAGCTTCCACCCTGGTTTTGACCTCACAATGGAGACGGCACCTTCGTCGCACAGCTTAGAACCTTTTACAAACTCCAGGATGCCTCATTATGAGGAAgatgattaa 675 0.4874 MAESQSGAGSSGNRRGKGANAAKRAMAGVTQDASAVPPCGACKFLRRKCSSGCIFAPYFGTDQGAARFAAVHKVFGASNVSKLLSGISTNHRHEAAATISYEAQARLSDPVYGCVSTILALQQQVTAMQAEVSMMQSQLMNRRYAFASAIQTTHQQQHQILQQPPNFNVSVQPEYSNNSSASTNNFMNMNSFHPGFDLTMETAPSSHSLEPFTNSRMPHYEEDD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02884 224 MobiDBLite consensus disorder prediction 1 24 - -
Tsu03g02884 224 MobiDBLite consensus disorder prediction 201 224 - -
Tsu03g02884 224 ProSiteProfiles LOB domain profile. 37 139 IPR004883 -
Tsu03g02884 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 9 210 - -
Tsu03g02884 224 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 210 - -
Tsu03g02884 224 Pfam Lateral organ boundaries (LOB) domain 38 136 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02884 Tsu-Chr3 38928958 38930000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02884 38 224 AS2 family AT3G03760 59.898 9.61e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu03g02884 LOB 2.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02884 - - aprc:113866578 269.626