Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02883 ATGGAAAATAAGCTTCATCCAAAAGTGCTTCTAGTTTTAGTCacaatttttctttcaatttcttaCACAAACCAACTTCAATCCTCTCACACTCGAACCCTTTTACGAATCAAACGTCTCTTAAACTTTCCATCAATTTTAAGCTCATGGAATTCAACTACAGATTTTTGCAACACAGATTCAAAAGCTTCTCTAACTGTTGTATGCTATGAACAAACCATAACTCAGCTACACATAGTTGGTGAAACAAAACCTCAACAACTTCTTCCAAAAAACTTCTCAATAGATTCATTTTTCACAACACTTTTGAGAATTCCAACTCTAAAAGTTCTCACACTAGTTTCCTTAGGCTTGTTTGGTCCACTTCCTAGCAAAATAAGTGGTTTATCATCTTTGGAAATAGTTAACATGAGTTCAAATTTTCTATATGGTAAAATCCCTCAAGAACTTCCATTGCTTTCAAATCTTCAAGCACTTATTCTTGATAACAATATGTTTGATGGACATTTACCTGATTGGTTGGATTCGTTTCCATCGTTAactgttttgaatttgaaacaaAACTTATTCAATGGTTCGCTTCCTGATTCGTTGAGTAGCTTAACAAATATGCGAGTTCTTTCGCTTTCTCATAACCGTTTCTACGGATCAGTACCGGATTTGAGCCGGTTGATTAATCTTCAAGTGTTGGAATTGGATGATAATAGCTTTGGTCCTAACTTTCCTAGAACTTATAACAAGTTGGTTACTTGTGTCCTAAGAAACAACAAGTTTAGGTCTAGTTTACCTGATAATATGAGTTCATATTATCAACTTGAGAGATTCGACATCTCGGAAAACGCGTTTGTTGGACCATTTCAGTTAGAATTGTTTTCTCTTCCTGCAATTAGTCATATCAACATTTCAAGTAACAAATTGTCAGGAATGCTTTTCGAGAATCTGTCGTGTAATTCTCTTCTAGAAGAAGTTGATTTGTCTTCAAATCTTTTGACCGGAAGATTACCAAAATGTTTAGTGTCAAATTCCAATGATAGGAAATTTTTGTATGGTGGAAATTGTTTAGAGGATACAAATCAAAGTCACAATCAACATGAACAAGCTTTTTGTCACACTGAAGCTATAGCTGTTGGAATTGGACTTAATGAGAGAAAGAAGCATAAAGGAGTATCTAAAACAGTTTTAGCTTTTGGAATTATTGGTGGAATTTTTGGAGGAATTTCACTTGTTGCATTGatttttatgattatgattagaAGAGGAAGTGGTAAAAGCTTGATGATGAAGAATTcgaaaacaaaattgatatCAGAAAAAGCAGCTTCTGGAAAGTTAATCTCTGATTCAAGGTATGTACCTAAAGCAATGAAGTTTGGAACTGTTGGCCTGCCACCTTATAGAGCTTTCTCACTGGAAGAGATTGTGACAGCCACTAACAACTTTGATACTACTTCTTTCATTGGTGAAGGTTCTCAAGGACAGATGAACAGAGGTCAACTAAAGGATGGTTCACTAGTTGCCATTAGAAGTGTAAAATTGACAAAAAGCTGCAGGACTAGAGATTTCATGCAGCACATAGAATTGATATCAAAATTCAGGCATCATCATTTAGTCAGTGTTCTTGGACATTGCTTTGAACATTATTTAGATGATTCAAATGTCAGAAGAATATTTATTGTCTTTGAGTATGTACCTAATGGATCACTCAAGACTTGGATCACAGATAGGCATTATAGAAAGTCTCTTACTTGGACTCAACGCATAGAAGCTTCTATTGGAGTAGCGAAGGGAATCCAATTTTTGCATACAGAGATTGTTCCTTCTGTATATTCAAACAATCTCAAAATAACTGATGTTTTATTGGATCAAAACTTTGTTGCAAAAATCAGTAGTTATAACATGCCTTTGTTATCCAACATTGGAAAgGATGGTCAAGGAAATATATTCAAAAGTCCTAGCTTTAATAAAAGTGTAAAATGTGAAGACAAGTTTGATATATATGATTTTGGGGTGATATTGATGGAACTCATTCTAGGAAGGACAATAAAGTCAAGAAATGTGGACACTTTGAAGGATttgTTACAATCAAGCATAACATCAGATGATGAAGCTAGAAGAAGCATTATAGATTCATCGATCCGTAACGCGTGTTTGGATCAATCATTGAAGACAATGATGGAAATTTGTGTGAGATGTTTAGTTAAAGAACTAGAAGAAAGGCCTTCTATAGAAGATGTCTTGTGGAATTTGCAGTTTGCTTCTCAAGTTCAAGATGCATGGAGAGGAGAGTCTCTAAGTAGTGATAGCTCTCCCATCTCGCCTTTACCGTCTCAACGAATGAATTTCCATTAG 2349 0.3401 MENKLHPKVLLVLVTIFLSISYTNQLQSSHTRTLLRIKRLLNFPSILSSWNSTTDFCNTDSKASLTVVCYEQTITQLHIVGETKPQQLLPKNFSIDSFFTTLLRIPTLKVLTLVSLGLFGPLPSKISGLSSLEIVNMSSNFLYGKIPQELPLLSNLQALILDNNMFDGHLPDWLDSFPSLTVLNLKQNLFNGSLPDSLSSLTNMRVLSLSHNRFYGSVPDLSRLINLQVLELDDNSFGPNFPRTYNKLVTCVLRNNKFRSSLPDNMSSYYQLERFDISENAFVGPFQLELFSLPAISHINISSNKLSGMLFENLSCNSLLEEVDLSSNLLTGRLPKCLVSNSNDRKFLYGGNCLEDTNQSHNQHEQAFCHTEAIAVGIGLNERKKHKGVSKTVLAFGIIGGIFGGISLVALIFMIMIRRGSGKSLMMKNSKTKLISEKAASGKLISDSRYVPKAMKFGTVGLPPYRAFSLEEIVTATNNFDTTSFIGEGSQGQMNRGQLKDGSLVAIRSVKLTKSCRTRDFMQHIELISKFRHHHLVSVLGHCFEHYLDDSNVRRIFIVFEYVPNGSLKTWITDRHYRKSLTWTQRIEASIGVAKGIQFLHTEIVPSVYSNNLKITDVLLDQNFVAKISSYNMPLLSNIGKDGQGNIFKSPSFNKSVKCEDKFDIYDFGVILMELILGRTIKSRNVDTLKDLLQSSITSDDEARRSIIDSSIRNACLDQSLKTMMEICVRCLVKELEERPSIEDVLWNLQFASQVQDAWRGESLSSDSSPISPLPSQRMNFH 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02883 782 Gene3D Ribonuclease Inhibitor 248 374 IPR032675 -
Tsu03g02883 782 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 775 - -
Tsu03g02883 782 Gene3D Transferase(Phosphotransferase) domain 1 564 760 - -
Tsu03g02883 782 SUPERFAMILY Protein kinase-like (PK-like) 461 753 IPR011009 -
Tsu03g02883 782 Gene3D Ribonuclease Inhibitor 27 247 IPR032675 -
Tsu03g02883 782 Pfam Protein tyrosine and serine/threonine kinase 484 746 IPR001245 GO:0004672|GO:0006468
Tsu03g02883 782 Gene3D Phosphorylase Kinase; domain 1 448 562 - -
Tsu03g02883 782 ProSiteProfiles Protein kinase domain profile. 480 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02883 782 SUPERFAMILY L domain-like 30 355 - -
Tsu03g02883 782 PANTHER OS07G0166700 PROTEIN 7 775 IPR045272 GO:0004714|GO:0006468
Tsu03g02883 782 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02883 Tsu-Chr3 38918125 38924794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02883 43 775 Miscellaneous Gene Families AT3G03770 59.060 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tsu03g02883 PK_Tyr_Ser-Thr 4.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02883 - - gmx:100813207 1102.43