Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02882 ATGTCTTCCGAAAACATATCATCTTCCCCTCCTTCTCCTAAATCTAGCATGAATATTGGCCACAACTCACATCCACACTCATACCATCATCCCTTACCCAATTCCTCATCAGCTACTGCTACACATAGGTTCGGTAGTCACGCTCCTGGAATAAGGAAAGCAATGTTGAGACTTGAAGCTGAGTTTGGCCATCCACATATCTCATTATTgcaatcaattaaaaataataatactaatgtaATCAACATtcacaacaataacaacatgATGAGTTCTATTGTTGATGGTTATAATACTGATCTCAGTGTTGCAGGCTCATCACAATCGCTCGAGCCGTCATTCGATAAGATGATCACCGCTAGTACTTATGTTGATGAGGCTGATGTTGGGGTTGACGacgacgacaacaacaacacaaagaATGTTAATGATGGTAGAATTCATAACCTACCAAGCAAAAAACATGGACCATACATGTGTCTAAAGTGCAATCAAGTGTTTTACTAA 507 0.3491 MSSENISSSPPSPKSSMNIGHNSHPHSYHHPLPNSSSATATHRFGSHAPGIRKAMLRLEAEFGHPHISLLQSIKNNNTNVINIHNNNNMMSSIVDGYNTDLSVAGSSQSLEPSFDKMITASTYVDEADVGVDDDDNNNTKNVNDGRIHNLPSKKHGPYMCLKCNQVFY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02882 168 MobiDBLite consensus disorder prediction 129 148 - -
Tsu03g02882 168 MobiDBLite consensus disorder prediction 1 43 - -
Tsu03g02882 168 MobiDBLite consensus disorder prediction 1 44 - -
Tsu03g02882 168 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02882 Tsu-Chr3 38912658 38913164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02882 90 167 C2H2 Transcription Factor Family AT2G15740 32.911 9.08e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02882 - K21852 mtr:MTR_3g084720 85.8853