Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02868 ATGGCACCCCAGAAACGCCTCCTTATTGACAATCCACCCAGTGCCTCCTCCACCTCCGACTCTTCCTCCGACGATGCAAACCAGTATATCCAACTACCTTCTAAACACCCTGTAGTCGAAGTTGATTCTTCATCCAGCGAAGAAGATGTTCAACATTCTCAACCAGCTTCCCAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCAGTTGCTACTTCTGAATCGGGTTCTCAATCCGAATCCGAACCACTCGGTTCTACTCCTAGGTCCGGAACTAAGCGTTCCCTAGACACCAACAACGCGAACGGAAGTTCGAAGAAGGAAAAAACTGTTTCCGCTCTTGGTGGTTCTGACGAGAATGATGAGATGGAGGAAGATGTTAGATTGATTGGTGATGACTCAAAAAAGAGTTCTCATAGACTCTTTAGTGAAGAAGATGAGCTTGCCATTTTGAAAGGTCTTGCTATTTTCACTTCCGAAACTGGAAAGGATCCGTTGAATGATTCAACTGACTTTCATAGTTTCGTGAAGAAATCGCTTTGTGCTGAGGCGACTAGCCAAcaattgaaaaggaaaattcGTAGTTTAAAGAAGAAGTTCGAAACAAATGAGAGTTTTACTAAATCTCATGACAAAAAAGCTTTTGAACTTTTTAAGAAGATTAGTTGGGTATTCAATGGTGGGagtgaagcaaatggaaaaGTTCTTAGTGGAAAGAGTCCAAGGAAGGATGCTACTGTTAAGCACGTTGGTTCTACTTCTAAAATAGTGGAAAGTGATGTTGATAATTTCATTTTGAATGGAATTCTTAGTTTTGATCGTGATATGGGTTTGTGTATTTTGGATAAGAATGTTGTGAAAAATGGATTGGAATCAATTGGGGAATCAAAAAAGGCTGAAATCCAGGGAAAATGCAAGCAGCTGCAAATTGCTGAAATGGAGGTGTTTCTGAATCGGGTGCAGTTGATAAAGGATCAAGTTAACTTGGCAGTCCAGGCACTTGAGAGCTCGAACAATTAG 1026 0.4016 MAPQKRLLIDNPPSASSTSDSSSDDANQYIQLPSKHPVVEVDSSSSEEDVQHSQPASQNPPPSTPISNPKPVATSESGSQSESEPLGSTPRSGTKRSLDTNNANGSSKKEKTVSALGGSDENDEMEEDVRLIGDDSKKSSHRLFSEEDELAILKGLAIFTSETGKDPLNDSTDFHSFVKKSLCAEATSQQLKRKIRSLKKKFETNESFTKSHDKKAFELFKKISWVFNGGSEANGKVLSGKSPRKDATVKHVGSTSKIVESDVDNFILNGILSFDRDMGLCILDKNVVKNGLESIGESKKAEIQGKCKQLQIAEMEVFLNRVQLIKDQVNLAVQALESSNN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02868 341 PANTHER BNAANNG10740D PROTEIN-RELATED 10 339 IPR007592 GO:0006355
Tsu03g02868 341 MobiDBLite consensus disorder prediction 69 113 - -
Tsu03g02868 341 MobiDBLite consensus disorder prediction 1 127 - -
Tsu03g02868 341 PANTHER STOREKEEPER PROTEIN 10 339 - -
Tsu03g02868 341 Pfam Protein of unknown function, DUF573 141 223 IPR007592 GO:0006355
Tsu03g02868 341 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02868 Tsu-Chr3 38733299 38734789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02868 42 335 GeBP Transcription Factor Family AT1G61730 30.650 2.02e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tsu03g02868 DUF573 2.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02868 - - mtr:MTR_2g010790 259.61