Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02850 ATGGATACAGGAATCACAGGATATAAACGTCTGAAAAATCCCGAGGAGAAAAAATTGCAAATCAAAAAGCGCAAATTAATTGACATTCCTAATCACTTCAATGCATTACTAGTAGATGGTGTGACTGCAACCAGACGTTTGGAGCATCATATGCTTGAATCAATAGGACTTCGAACAGAGCCTGCAAATAATGCTCAAGAAGCAATACAACTTTTGTTGACTGGTTTGAAATTTGACTTCatatttgttgattttgatttgtcaATAATGAATGGACCTGAGCTGGTGAGGCAAATGCGTGCAATGGGGGTACAAAGTAAGGTGGTTGGTATGTTAACCAACTTCAATGATCATAATGTGCAAATGTTTCAAGAAGCAAGAGCTAATGCTAAAGTCGTGGCTTCTTCCTCCTCCAAATCCAAAGTTAAGCTTCTTGAAGAAATCAATATTTCCATTGAGAAGGTGAAAACTGAGTTTAATGCTCAAAGAACTGCTGCTAATAAATTGGAAAGGAGTAAGAATGTGAACATGATGAAATTAAAGGAGGCTGGAGACAAAATGAAGAAAACTGAAGAAAATTTAGATAAACTTAATAAGAACAACAAGATGGAGCTCATTGATGATGGTTTTTGA 633 0.3523 MDTGITGYKRLKNPEEKKLQIKKRKLIDIPNHFNALLVDGVTATRRLEHHMLESIGLRTEPANNAQEAIQLLLTGLKFDFIFVDFDLSIMNGPELVRQMRAMGVQSKVVGMLTNFNDHNVQMFQEARANAKVVASSSSKSKVKLLEEINISIEKVKTEFNAQRTAANKLERSKNVNMMKLKEAGDKMKKTEENLDKLNKNNKMELIDDGF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02850 210 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 148 - -
Tsu03g02850 210 Coils Coil 152 172 - -
Tsu03g02850 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 148 - -
Tsu03g02850 210 Coils Coil 180 207 - -
Tsu03g02850 210 Pfam Response regulator receiver domain 36 122 IPR001789 GO:0000160
Tsu03g02850 210 Gene3D - 11 170 - -
Tsu03g02850 210 SUPERFAMILY CheY-like 32 130 IPR011006 -
Tsu03g02850 210 CDD REC 36 117 - -
Tsu03g02850 210 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Tsu03g02850 210 SMART REC_2 33 148 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02850 Tsu-Chr3 38528933 38531078 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02850 17 129 Response Regulator Gene Family AT3G04280 32.759 6.44e-07 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu03g02850 Response_reg 3.2e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02850 - K17589 cam:101509883 138.272