Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02837 ATGGATTTCACATCAGGGAAGAATTCATCAgagaacaataacaacaataacgCTGAAAACGCTCACCAAAACGTTGATTCTTCTTCTCAATTTGGTTCTGATTCCTACAATGTCAAAGAAACTGAAGAGCGTCAATCTCGTGAACTCAAAGCTGGTCTTCACCCTCTCAAGACCAAGTTTGTATTTTGGTACACTCGTCGGGTACCTGGAATTCGAAATCAATCATATGAGGACAACATTAAGAAGATTGTTGAATTCAGTACGGTTGAAGGATTTTGGGTCTGTTATTGCCATCTTACTCGTCCTTCTGCTTTGCCTAGTCCAACAGATCTGCACCTTTTCAAAGAAGGGATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGAAAATGGATTATACGATTCAAAAAGGCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTGCTTGCCTTAGTGGGTGACCAATTGGATTATGGTGATAACATATGTGGTGCGGTGCTAAGCATCCGATTTAACGAGGATATAGTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCTGTTATGGCTTTGAGAGATTCGATTAAGCGTCACTTGAAGCTTCCTCACAGCTATCTTATGGAGTACAAGCCCCATGATGCTTCTCTGCGAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 699 0.4163 MDFTSGKNSSENNNNNNAENAHQNVDSSSQFGSDSYNVKETEERQSRELKAGLHPLKTKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVCYCHLTRPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDHQAVMALRDSIKRHLKLPHSYLMEYKPHDASLRDNSSYRNTWLRG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02837 232 SUPERFAMILY eIF4e-like 40 228 IPR023398 -
Tsu03g02837 232 PANTHER BNAA10G16710D PROTEIN 41 232 - -
Tsu03g02837 232 MobiDBLite consensus disorder prediction 1 36 - -
Tsu03g02837 232 Pfam Eukaryotic initiation factor 4E 55 212 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tsu03g02837 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 41 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tsu03g02837 232 MobiDBLite consensus disorder prediction 1 47 - -
Tsu03g02837 232 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Tsu03g02837 232 Gene3D RNA Cap, Translation Initiation Factor Eif4e 26 225 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02837 Tsu-Chr3 38416470 38420268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02837 24 232 Eukaryotic Initiation Factors Gene Family AT5G18110 80.476 1.24e-127 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02837 K03259 - gmx:100499744 405.986