Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02774 ATGAAAAGACAAATTCTAACTTATGGTGTTGTGAAGGTTGTTTTGGATTTGGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCTCAGGTAGGTGCTAAGAAGGTTTATGCCGTGGAAGCTGCTAAGATGCCAAAACACGCCGGTGCACTTGGAGCCATGGTGGAAGTTTTAAACTCTCCTGAAATGGATTTTGTGAGCATGTCCTCCCAAATGAGAACACTCGATTGA 231 0.4372 MKRQILTYGVVKVVLDLGAGSGILAIWSAQVGAKKVYAVEAAKMPKHAGALGAMVEVLNSPEMDFVSMSSQMRTLD 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02774 76 Pfam Ribosomal protein L11 methyltransferase (PrmA) 13 43 - -
Tsu03g02774 76 Gene3D Vaccinia Virus protein VP39 3 71 IPR029063 -
Tsu03g02774 76 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 55 IPR025799 GO:0016274|GO:0018216
Tsu03g02774 76 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 55 - -
Tsu03g02774 76 CDD AdoMet_MTases 14 44 - -
Tsu03g02774 76 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 49 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02774 Tsu-Chr3 37081099 37082073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02774 13 66 C2H2 Transcription Factor Family AT3G12270 43.636 4.37e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02774 K11434 - atr:18431737 66.6254