Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02723 ATGGCTCCTCCATGGGTTCAAGAACTTCATCTCAATCCCTTAACTATTCCGGTCACTATCGTAAACACATTCTCCGTCACTCCATCAAAACCTATTCCGGTTAAACCAGGAGATAGTTTATATCTTTCAAATCTTGATGATATGATTGGCGCACGCGTTTTTACACCAACCGTATACTTTTATCAATCGGACAACTCTAGTACTTGTGTCCAAAAACCGGTCACGGAAATACTTCGCCTTGCTCTCGCGGATGTTTTGGTTCCTTATTACCCTCTCTCAGGAAGGTTAAGAGAAACCAAAACCGGTAAATTGGAAGTGTTTTTcggagaaaaagaagaagaaaaaggcgCGTTAATGGTTGAAGCAAGGTCGAATATTGCATTATCTGAATTAGGTGATTTTGCTGCTCCAAACCCATCTTGGGAACCATTGATATTCAAATTCCCAAATGAAGAACAATACAAAGTCTTAGAAATGCCACTTGTTATAGCTCAAGTTACAATCTTCGCGTGTGGTGGATTTAGCCTCGGTTTACGTCTTTGTCATTGTATCTGTGATGGAATGGGAGCAATGCAGTTTCTAGGAGCATGGGCTGCAACAGCGAAAACTGGAACATTGGTAACAGAACCTAAACCTTCTTGGAACAGAGAAATTTTTAAGCCACGCGATCCGCCTCAAGTTAAATTTCCACACATGGAGTTCATGAGAATCGATGAAAGATCAAATTTAACAATGAAACTATGGAAAACAAAGCCGGTtcaaaaatgttataaaataaaacgCGAATTTCAAAACCAATTGAAATCGCTTGCGCAACCATTTGACGCTGCTGGTTGTACTACATTTGATGCAATAGCAGCACATGTTTGGAGATCATGGGTTAAAGCACTTGATGTTAAGCCACAAGATTACGAATTAAGGTTAACATTTTCGGTTAATGCTAGACAGAAACTTAAAAATCCACCATTAAAAGAAGGGTTTTATGGTAATGTGGTTTGTGTTGCTTGCACAACAAGTACTGTTTCTGAGCTTGTGAATGGTAAATTACCAGAAACAACACTTTTAGTTCGCGAAGCGAGACAGAGCGTAACCGAGGAATATTTGAGATCAACTGTTGATTATGTTGAAGTTGATAGACCAAAACAACTTGAGTTTGGTGGTAAACTTACAATAACACAATGGACAAgattttcaatttataaatGTGCTGATTTTGGATGGGGTAAACCAATTTATGCTGGTCCTATTGATTTAACACCAACACCTcaagtttgtgtttttttaccTGAAGGTGAAGAATGTGATTGTAGTAATGGTTCTATGATTGTTTGCATTTGTTTGCCACAATCTGCTGCTGACAAGTTTACACAAGCTTTGTTGATTGATTCAATGTATTAA 1398 0.3655 MAPPWVQELHLNPLTIPVTIVNTFSVTPSKPIPVKPGDSLYLSNLDDMIGARVFTPTVYFYQSDNSSTCVQKPVTEILRLALADVLVPYYPLSGRLRETKTGKLEVFFGEKEEEKGALMVEARSNIALSELGDFAAPNPSWEPLIFKFPNEEQYKVLEMPLVIAQVTIFACGGFSLGLRLCHCICDGMGAMQFLGAWAATAKTGTLVTEPKPSWNREIFKPRDPPQVKFPHMEFMRIDERSNLTMKLWKTKPVQKCYKIKREFQNQLKSLAQPFDAAGCTTFDAIAAHVWRSWVKALDVKPQDYELRLTFSVNARQKLKNPPLKEGFYGNVVCVACTTSTVSELVNGKLPETTLLVREARQSVTEEYLRSTVDYVEVDRPKQLEFGGKLTITQWTRFSIYKCADFGWGKPIYAGPIDLTPTPQVCVFLPEGEECDCSNGSMIVCICLPQSAADKFTQALLIDSMY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02723 465 Gene3D - 238 459 IPR023213 -
Tsu03g02723 465 Pfam Transferase family 17 457 - -
Tsu03g02723 465 PANTHER F21B7.2 12 460 - -
Tsu03g02723 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 460 - -
Tsu03g02723 465 Gene3D - 15 236 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02723 Tsu-Chr3 35917138 35918535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02723 21 462 Monolignol Biosynthesis Gene Families AT5G48930 30.464 2.83e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02723 K15400 - gmx:100802814 791.956