Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02699 ATGAAAGGATGGGATGGGATTCAATCTTCtgtctcttcttcttctcgaTCGACTTCCACGATCAGCCATCGAGTTCCTTCTCAATCGGTTCGACTCGGACGAGTCCAACCTCAGGCTCCAACTTTTCGCACAATTTTCTGTAACGATCGTGAAGCCAATCTTCCTGTTCGATTCAAGGGAAATTCAATATCAACTACAAAATACAACTTTTTCACCTTTCTTCCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCCAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACTACTCCAATTAGTCCTGTCTCTCCAATAACTAACGTGCTTCCTCTATCGTTGGTGCTTCTCGTTTCTCTTATTAAGGAAGCTTTTGAGGATTGGAAGCGTTTTCAAAACGACATGTCCATAAACAACAAAAAGGTAGATGTTTTACAAGGTCAAAGGTGGGAGTCTATGCCCTGGAAAAAGTTGCAGGTTGGAGATATTATCAAGGTTAAGCAGGACGGATTCTTTCCTGCAGATTTGCTTTTCTTGGCCAGTACGAATGCAGATGGTGTCTGTTACATTGAGACTGCTAATCTGGACGGGGAGACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAGTGTGAGCAACCGAACAATTCGTTGTATACATTTACTGGAAATCTTTTGATTCAAAAGCAAACACTTCCCCTCAGTCCAAACCAGATTCTTTTGCGAGGATGCAGTCTCAGAAATACAGAATATATTGTTGGTGTAGTTCTTTTTACAGGACAGGAAACAAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCGCTCTGTTTGCAACACTCTTTATGATGTGTTTTATTGGAGCCATAGGCAGTGCTATTTTCGTGAACAAAAAACACTTCTACTTACATCTTGATTCATCAGAGGAGGGATCGGCACAGTTCAATCCAAAAAACAGATTTGTGGTTTTTGTTCTGACTATGTTTACCCTTATCACACTATATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATCCAATCAACTCAATTTATCAACAAGGATTTAGGCATGTACCACAATGAAAGCAATACACCGGCATTGGCCAGAACTTCAAATCTGAATGAGGAACTTGGACAGgTGGAATACATTTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCGATTGGAGCAGAGGTCTATGGAAATGGTGTGACCGAAATTGAGAGGGGACTAGCAGAGCGCAATGGCATGAAAATTGAGGAAAATAGATCGCCCAATGCTGTGCAAGAGAAgggttttaattttgatgatgcgCGGCTTATGAGAGGAGCTTGGAGAAATGAGCCCAATCCGGATGCCTGCAAAGAATTCTTTAGATGCCTTGCTATATGCCATACTGTACTTCCGGAGGGTGATGAGAAGTCCCCTGAAATGATCAAATATCAAGCTGCATCACCTGATGAGGCTGCGTTGGTTATTGCTGCAAAGCACTTTGGTTTTTTCTTCTACagGCGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAGATGGGCAAAGTTCAAGATATATCCTATGAGATTCTCAATGTGCTTGAATTTAATAGTACAAGGAAGCGCCAGTCAGTTGTATGTCGTTATCCAGATGGAAGGCTTGTGCTATACTGTAAGGGTGCTGATACTGTAATCTATGAGAGACTGGCTGATTCTAACAACGATATCAAGAAAATCACCAGGGAGTATTTGGAGCAATTTGGATCTTCTGGACTACGTACATTATGCCTAGCTTACAGAGAATTGCATCCAGATGTTTACGAAAGTTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACAGGATCGTGAAAAGAAATTAGACGAGGTGGCGGAACTCATAGAAAATGATCTCATTTTAATTGGTAGCACTGCAATAGAAGACAAGCTTCAAGAAGGAGTACCAAGATGCATAGAGACGCTTCAAAGAGCTGGCATTAAAATTTGGGTTCTGACTGGGGACAAGATTGAAACAGCAATTAACATAGCCTATGCATGCAGTTTGATAAACAATGAGATGAAGCAATTCGTTATCAGTTCAGAAACTGATGAAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGACGAAGTGAAAAGAGAGCTTAAGAAATGCCTCGAGGAAGCACAAAGCTATTTTCACACTGTATCTGGACCAAAATTAGCACTTGTAATTGATGGGAAGTGTCTAATGTATGCATTGGATCCAAGTTTAAGGGTGATGCTACTCAATCTTAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGGGTTTCTCCTTTACAGAAAGCACAGGTGACAAGTATGGTCAAGAAAGGTGCAAAGAAAATAACCCTTAGTATTGGTGATGGAGCCAATGATGTAAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGAATGGAGGGAATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAGTTCCGTTACCTTGAAGATTTGCTTCTCGTTCATGGCCGATGGTCATATCTGCGAATATGCAAGGTGGTGATATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAAAGGTTCTATGATGATTGGTTTCAGTCTCTATATAATGTTATTTTCACGGCACTGCCTGTGATCATTGTTGGACTATTTGACAAGGATGTTAGTGCATCTTTATCCAAGAAGTATCCCGAATTATACATGGAGGGAATAAAAAATGTCTTCTTCAAATGGAAAGTCGTGGCTATATGGGCCTTTTTTTCTGTGTACCAGTCTCTAATATTCTTCTATTTTGTGAGTACATCAAATTTAAGTGCTAAAAACTCTGCGGGAAAGATATTTGGTCTCTGGGATGTCAGTACAATGGCCTTCACTTGTGTTGTTGTAACCGTCAACTTGAGATTACTTATGATTTGCAATTCAATCACAAGATGGCACTACATTAGTGTTGGTGGAAGCATattagcttggtttgtttttatttttatatattcagGGATTACCACTCCGTATGATAGACAGGagaatatttattttgtcatatatgTCTTGATGAGTACTCTCTATTTCTACGTCACACTACTACTTGTTCCTGTTGCTGCACTTTTCTGTGACTTTGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAAATTGTTCAAGAAATACATAGGCATGAGATTGATAGCACTGGTAGAGCACAGCTGCTGGAGATAGGGAACCAGCTTAGTCCAAGTGAGGCAAGGAGCTATGCCATATCTCAACTCCCACGAGAGATATCAAAGCACACCGGATTTGCTTTTGATTCACCTGGTTATGAGTCTTTTTTCGCTGCACAGCTTGGTGCATATGCTCCACCAAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAGATCACGGCCCAAGACTGAGCAGCAAAAATAA 3684 0.3939 MKGWDGIQSSVSSSSRSTSTISHRVPSQSVRLGRVQPQAPTFRTIFCNDREANLPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSINNKKVDVLQGQRWESMPWKKLQVGDIIKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLSPNQILLRGCSLRNTEYIVGVVLFTGQETKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKHFYLHLDSSEEGSAQFNPKNRFVVFVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHNESNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGAEVYGNGVTEIERGLAERNGMKIEENRSPNAVQEKGFNFDDARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDEKSPEMIKYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDISYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADSNNDIKKITREYLEQFGSSGLRTLCLAYRELHPDVYESWNEKFIQAKSSLQDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPRCIETLQRAGIKIWVLTGDKIETAINIAYACSLINNEMKQFVISSETDEIREVEDRGDQVEIARFIKDEVKRELKKCLEEAQSYFHTVSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAKKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLEDLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGIKNVFFKWKVVAIWAFFSVYQSLIFFYFVSTSNLSAKNSAGKIFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFVFIFIYSGITTPYDRQENIYFVIYVLMSTLYFYVTLLLVPVAALFCDFVYQGVQRWFFPYDYQIVQEIHRHEIDSTGRAQLLEIGNQLSPSEARSYAISQLPREISKHTGFAFDSPGYESFFAAQLGAYAPPKAWDVARRASMRSRPKTEQQK 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02699 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Tsu03g02699 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1133 IPR023298 -
Tsu03g02699 1227 SUPERFAMILY HAD-like 411 897 IPR036412 -
Tsu03g02699 1227 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Tsu03g02699 1227 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Tsu03g02699 1227 SFLD C1.7: P-type atpase like 405 906 - -
Tsu03g02699 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tsu03g02699 1227 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g02699 1227 SUPERFAMILY Calcium ATPase, transduction domain A 140 284 IPR008250 -
Tsu03g02699 1227 Pfam Cation transport ATPase (P-type) 520 615 - -
Tsu03g02699 1227 Gene3D - 554 687 IPR023299 GO:0000166
Tsu03g02699 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Tsu03g02699 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 17 1223 - -
Tsu03g02699 1227 Gene3D - 688 895 IPR023214 -
Tsu03g02699 1227 CDD P-type_ATPase_APLT_Dnf-like 60 1015 - -
Tsu03g02699 1227 Pfam Phospholipid-translocating ATPase N-terminal 45 109 IPR032631 -
Tsu03g02699 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 934 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu03g02699 1227 Pfam E1-E2 ATPase 139 380 - -
Tsu03g02699 1227 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 17 1223 - -
Tsu03g02699 1227 Gene3D - 123 287 - -
Tsu03g02699 1227 SFLD p-type atpase 405 906 IPR044492 -
Tsu03g02699 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 429 702 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02699 Tsu-Chr3 34620092 34652768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02699 13 1226 Primary Pumps ATPases AT1G59820 79.259 0.0 2063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02699 K14802 - gmx:100787473 2261.49