Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02691 atgaaggagagaaagagaatatGGACTCTTGTATTTCTTATTCACAAAAGTTCCCCTCTCCCTGAGGAGTGTGCCGTTTTACTTCTTCCTCCATTGCCGTTGCTCGTCGATCATTGGTCGCACCTTTGTGAATCTTTGACGTTGGAGGAATTTCATTCACGCTGTCATTCGCCACCTTCCACCAACGCTCACGTTGCAGTTCTTCCCCTTTTGCTGCTTATGGAGATAAATGAATGTGAATCAATTGAAACCGATGAGCCCAAAGATATTTATCTCGGTCAAGTTGTACATAGCAAAGAAGAAGCTTATGATTTATACCAAGAACATGCCTTCAAAGTTGGTTTTAGTGTAAGAAAGGGGAAGGAGTGTTATTATGAtaatgagaaaaagaatacACGGTTGAAAGATTTTTATTGTTCCAAACAAGGGTTCAAGAACAATGAACCTGATGGTGAAGTGGCTTATAGAAGAGGAGATTCAAGAACAAATTGTAAAGCTATGGTGAGATTTAATGTGACTAAGGAAGGAGTGTGGAAAGTTACAAAGTTGATATTGAAACACAATCATGAATTTGTTCCGCTTCATCAAAGATATTTGTTACGTTCTATGAGAAATATGTCAAATCTCAAAGAAGACCGCATAAAGTCTATGGTGAATGATGCCATTAAAATTGGTGGATTTGACAAACATGGTGTAATGTTGAAAGATATGCATAATTATGTCTCCACTGAAAAGTTGAAATATATTGAAGCCGGAGATGCTCAATCTTTACTGAATCATTTACAAAATAGACAAGCACAAGATTCCATGTTCTATTACAGTGTGCAGTTAGACCAAGAATCACGTTTGACCAATGTCTTCTGGAGAGATGGTAAATCTGTAGTTGATTATAATTGCTTTGGGGATGTTGTGATTTTTGACACTACTTATCGTGCTAATAAATACAACCTTATTTGTGCCCCATTTGTTGGTGTAAATCATCATTTGCAAAATATCATGTTTGGTTGTGCTTTGTTATTTGATGAAAGTGAAGTTTCTTTTGCTTGGTTGTTCAAAACGTTTTTGGAGAGTATGGGAAACCAACAACCAAAAACAATCTTTACAACTCATGATCCAGCCATGGCTAAAGCGATTGGAGAGGTAATGCCAAATGCATGTCATCGTTTATGTTTATGGCACATAGCTAAGATTGCTCCTTCATATTTGGATTCTCTCATTTCCGATCAAAAGTTTCAAAGCTTATTTAGTAAATGCATGGGAGGTTGTGATTCAGAAGAAGAATTTCAAAGAACTTGGGATGAAATGATTAATGTGTATAAGCTTCAGGATCATCAATGGTTGAGCAGTATGTATGAAATTCGCCATAAGTGGAGCACTGCTTATAGCAAGAATGTATTCTCTGCTGGTATCAAGTCCTGCCAAAAGATTGAGAGTACAAACAATGTGTTGGATGAGATAGCAGGGAAAACAACAACTCTCACACAATTTTTACTAGCATTTGAGAAGATGTTGAAAAAGTGGCGCCGCTTAGAGGTTGAGGAGGAATTCAAAAACAGCCAAAGTACACCTCCTCTTGTTATAAATATTAGTGAAACATTACGGCATGCATCTACAGTATATACTCACAAAGTCTTTAATCTTTTTCTGAACGAGTATCTTGAAGGGACAGGTGGAAGCACTTCTATAGAGATTGGTCAATCTGATAATGTGTCAAATCATGAAGTCATGTTGAACCATATgcctaataaaaaatatacagtGACATTTGACTCTTCCAATATGAAGATTAGTTGTAGTTGCTGCAAGTTTGGTTCTATGGGCATTCTTTGTAGTCATGCTTTGCGAATTTATAACATTAAAGGTATTTTAAGAATACCTGACCAATACTTCTTAAAAAGATGGTCAAAAAATGCAAGGTCCTTGATTTATGAGCACATAACTAGGGGCATGGGAGAAGATTCTTCCTCCAATTTGGGGATCAATGATGAAGATGCTGGTATTCTTTATCGTAATGCTATTATGAATTCATTCTACTCTAGTTTTGGAAAGTCAAGACAGCAAAGAAGCTCAAAATATCATGTGGAAATTACTTGA 2094 0.3567 MKERKRIWTLVFLIHKSSPLPEECAVLLLPPLPLLVDHWSHLCESLTLEEFHSRCHSPPSTNAHVAVLPLLLLMEINECESIETDEPKDIYLGQVVHSKEEAYDLYQEHAFKVGFSVRKGKECYYDNEKKNTRLKDFYCSKQGFKNNEPDGEVAYRRGDSRTNCKAMVRFNVTKEGVWKVTKLILKHNHEFVPLHQRYLLRSMRNMSNLKEDRIKSMVNDAIKIGGFDKHGVMLKDMHNYVSTEKLKYIEAGDAQSLLNHLQNRQAQDSMFYYSVQLDQESRLTNVFWRDGKSVVDYNCFGDVVIFDTTYRANKYNLICAPFVGVNHHLQNIMFGCALLFDESEVSFAWLFKTFLESMGNQQPKTIFTTHDPAMAKAIGEVMPNACHRLCLWHIAKIAPSYLDSLISDQKFQSLFSKCMGGCDSEEEFQRTWDEMINVYKLQDHQWLSSMYEIRHKWSTAYSKNVFSAGIKSCQKIESTNNVLDEIAGKTTTLTQFLLAFEKMLKKWRRLEVEEEFKNSQSTPPLVINISETLRHASTVYTHKVFNLFLNEYLEGTGGSTSIEIGQSDNVSNHEVMLNHMPNKKYTVTFDSSNMKISCSCCKFGSMGILCSHALRIYNIKGILRIPDQYFLKRWSKNARSLIYEHITRGMGEDSSSNLGINDEDAGILYRNAIMNSFYSSFGKSRQQRSSKYHVEIT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02691 697 Pfam MULE transposase domain 303 396 IPR018289 -
Tsu03g02691 697 PANTHER OS12G0160900 PROTEIN 84 688 - -
Tsu03g02691 697 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 688 IPR031052 GO:0006355
Tsu03g02691 697 SMART 26again6 596 623 IPR006564 GO:0008270
Tsu03g02691 697 Pfam SWIM zinc finger 585 616 IPR007527 GO:0008270
Tsu03g02691 697 ProSiteProfiles Zinc finger SWIM-type profile. 585 621 IPR007527 GO:0008270
Tsu03g02691 697 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02691 Tsu-Chr3 34506206 34510176 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu03g02691 MULE 2.7e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02691 - - lja:Lj4g3v2120630.1 925.62