Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02683 ATGCCGTCTCAAGCGGATCTAGATCGTCAAATCGAGCAGCTGATGGAGTGCAAGCCTCTGACGGAATCGGAGGTAAAGGCGCTGTGTGAACAAGCGAGGGCGATTCTGGTGGAGGAGTGGAACGTTCAACCGGTGAAGTGTCCGGTCACTGTTTGCGGCGATATTCACGGCCAATTTTACGATCTTATTGAGTTGTTTCGGATAGGAGGGAATGCTCCTCATACTAATTACCTCTTTATGGGTGATTATGTTGATCGTGGATACTATTCTGTGGAGACTGTTACACTTCTCGTGGCCTTGAAAGTTCGTTACAGAGATAGGATTACAATTCTCAGGGGAAACCATGAAAGCCGTCAAATTACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAATACGGAAATGCCAATGTCTGGAAATTCTTCACCGACCTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCACGGAGGTCTTTCACCTTCTTTGGATACGCTGGATAATATCAGAGCATTGGATCGTATACAAGAGGTTCCACACGAAGGACCAATGTGTGATCTCTTGTGGTCTGATCCCGATGATCGCTGTGGGTGGGGAATATCTCCACGTGGTGCTGGATACACATTTGGGCAGGATATAGCTTCTCAGTTCAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGATACAATTGGGCCCAGGAAAAGAATGTGGTCACTGTATTTAGTGCTCCGAATTACTGTTACCGGTGTGGGAATATGGCTGCTATACTGGAAATTGGAGAGAATATGGATCagaattttcttcaatttgatCCAGCCCCCAGGCAAATTGAGCCTGACACTACACGCAAGACTCCagattattttttgtaa 921 0.4452 MPSQADLDRQIEQLMECKPLTESEVKALCEQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPHTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWAQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Tsu03g02683 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Tsu03g02683 306 SUPERFAMILY Metallo-dependent phosphatases 4 293 IPR029052 -
Tsu03g02683 306 Gene3D - 2 306 IPR029052 -
Tsu03g02683 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Tsu03g02683 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Tsu03g02683 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Tsu03g02683 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 306 - -
Tsu03g02683 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 306 - -
Tsu03g02683 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02683 Tsu-Chr3 34303384 34309041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02683 49 225 Calmodulin-binding Proteins AT5G63870 37.209 2.19e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02683 K04382 - tcc:18609327 628.632