Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02652 ATGGCTTTCAATGTGATCCTTTTTTTGTGTcttgtttttcatatattttcaataCAAACATGTTATTGCCAAAACAATTCTCCTCAAAATATAGAAACTTTGTATCCAAATGAAACTTTAGCTTCACCACCAACAAATCAACCACCAAAGACACAACCATCATTTtcagcaccaccaccacctcaaGGACTAATCGCGGTATCGAAAAGTAGTTCATCAAATGGTAAGATAGCAAAAGCTGTGGCTGCAACTGCAGCAAGCACTATAGTTATTTGTGGTTTAATCTTCATTTTAGCTAAAAGGTGTttaaggaaaagaaagagatcaAGAGAGATAGTAACTAACATTGTTGTTGATGGAGATAGGCAACAAGTTATTGTGCCTAAAGGGaatgtttttgaaaaaattgatggaaatGTGAGAGGATTAATTGTTGATGAAGATGGTTTAGATGTGATTTATTGGAGAAAACTTGAAGAGAAGAATTCAAACAAGGATCTTTATAAAGATATCTTGAATAGTcctaaaaacaaagaagaaattgaagagagTCATGAAGAAGAAAATCGAGTGAAAAAATCTAAGTCCATTCAAGAAATTCCTCTTCTTAGAGGAAAATCTTCATCCTCACACTTGAATGTATTTGAAGAAGAGAATGATCTATATAAACTTCCAAGAATTCAATCTCAACCATCCAAAAATGGTGttcaaaaacaagattttcaaTCTCAACCCTCCAAAAATGGTGTTCAGAAACAAGAATTTCAATCTCAACCATCCAAAAAAGATGTTGTTCAGAAACAAGAATTtcaatctcaaccatccattcTACCATCAATTTCAGCAGCTGCACCACCACCTGCACCTCCTCCTCCAATTCCTGCTAGGAAGAGtcaagcaccaccaccacctcctccaATGAAGACGAGTACATCGAATTCATCATCAAAAGCTATCTCTCAAGGCAATCAAAGAAACTCTTCAGGGAAAGGTGTGGAAGAATCCATCAATGATCAAGTGAAATTGAAGCCTTTGCATTGGGATAAAGTGAATACTAATGCTGCTGATCATTCCATGGTTTGGGACAAAGTCGATCGCGGCTCATTCAGGGTTGATCAAAATCTTATGGAAGCACTCTTTGGTTATGTCGCGACCAACCGATTGTCGCCTAAACGACAGACTGAGTCAACCAGTCAAAGCAATGATGCCTTaacaaaaatattcattcttgaTCCTAGAAAGTCACAGAACATTGCTATTGTTTTGAAATCTCTAGGCGTCTCACGAGACGAAATTCTTGATGCACTCATTGATGGAAAAGGCCTCAATTCAGATACACTTGAAAAGCTTTCAAGAATTTCACCAACAGAAGAAGAGAAATCACTTATCCTTAAATATAGAGAAGATCCATCAAGACTAGCTGCAGCAGAATCATTCCTATATCACATTCTTAAAGCCGTTCCTTCAGCGTTTAATCGCTTGAACGCGATGCTATTCAGGTTGAACTGCGACACAGAGGTTATGGAAATCAAAGAGTGTTTGCAGACCATTGAATTTGGATGTAAAGAGCTTAGAAGTCAAGGAGTCTTTTTGAAGCTTCTAGAAGCAGTACTTAAGGCAGGTAATCGAATGAATGATGGAACTTCTAGAGGTAATGCTCaagcatttaatttaaattctcTAAGAAAACTTAATGATGTCAAAAGCAACAATGGAAAAACCACATTACTTCActttgttgttgaagaagtagTCCTTTCCGAAGGAAAACGCGCGGTTCTTAACCGAAATAACAGTCTAAACCGAAATAATGCGCTGTCACAAGCAACAaatgttgtttcagaagaaagaagagaaagagaatacAAAATGTTAGGATTGTCAATTGTGGGAGGAATAAGTTCTGAATTCTCCAATGTTAGAAGAGCAGCAAATTTGGATTATAAAAGTTTATTTGGTTCAATTTCACAACTATCTATTAGGCTTAATGAAATTAAAGAACTTGTGTTACAATGTGAGAATGGTGAAAGAGGAAATTTTGTGAAAgaaatgaattattttattgGAAATGCTGAGGAAGAACTGAAACTAGTGAGAGAGAAACAAACAATTGTGTTGCAGATTCTTAGTAAAACAACACAATATTATGAGTGttcaaaagagaaagaagaaaatgatcTTCAACTTTTTGGTATAATTAAGGATTTTTTGAGAATGGTTGATCAAGTTTGCATTGAAATTGCACGTGAAATGCAGAAAAAGAATCCTAAAGGAGTGTCTGGAACAAAATTGTCATGA 2298 0.3142 MAFNVILFLCLVFHIFSIQTCYCQNNSPQNIETLYPNETLASPPTNQPPKTQPSFSAPPPPQGLIAVSKSSSSNGKIAKAVAATAASTIVICGLIFILAKRCLRKRKRSREIVTNIVVDGDRQQVIVPKGNVFEKIDGNVRGLIVDEDGLDVIYWRKLEEKNSNKDLYKDILNSPKNKEEIEESHEEENRVKKSKSIQEIPLLRGKSSSSHLNVFEEENDLYKLPRIQSQPSKNGVQKQDFQSQPSKNGVQKQEFQSQPSKKDVVQKQEFQSQPSILPSISAAAPPPAPPPPIPARKSQAPPPPPPMKTSTSNSSSKAISQGNQRNSSGKGVEESINDQVKLKPLHWDKVNTNAADHSMVWDKVDRGSFRVDQNLMEALFGYVATNRLSPKRQTESTSQSNDALTKIFILDPRKSQNIAIVLKSLGVSRDEILDALIDGKGLNSDTLEKLSRISPTEEEKSLILKYREDPSRLAAAESFLYHILKAVPSAFNRLNAMLFRLNCDTEVMEIKECLQTIEFGCKELRSQGVFLKLLEAVLKAGNRMNDGTSRGNAQAFNLNSLRKLNDVKSNNGKTTLLHFVVEEVVLSEGKRAVLNRNNSLNRNNALSQATNVVSEERREREYKMLGLSIVGGISSEFSNVRRAANLDYKSLFGSISQLSIRLNEIKELVLQCENGERGNFVKEMNYFIGNAEEELKLVREKQTIVLQILSKTTQYYECSKEKEENDLQLFGIIKDFLRMVDQVCIEIAREMQKKNPKGVSGTKLS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02652 765 PANTHER FORMIN-LIKE PROTEIN 6 758 - -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 310 334 - -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 35 60 - -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 42 60 - -
Tsu03g02652 765 SUPERFAMILY Formin homology 2 domain (FH2 domain) 345 753 - -
Tsu03g02652 765 PANTHER FORMIN-RELATED 6 758 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu03g02652 765 SMART it6_source 332 755 IPR015425 -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 228 279 - -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 280 309 - -
Tsu03g02652 765 ProSiteProfiles Formin homology-2 (FH2) domain profile. 332 765 IPR015425 -
Tsu03g02652 765 Pfam Formin Homology 2 Domain 334 741 IPR015425 -
Tsu03g02652 765 Gene3D Formin, FH2 domain 353 758 IPR042201 -
Tsu03g02652 765 MobiDBLite consensus disorder prediction 228 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02652 Tsu-Chr3 33564156 33566986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02652 9 754 FH2 protein (formin) Gene Family AT1G70140 41.245 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02652 - - adu:107481275 670.233