Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02630 ATGAATGACGACGAGCCATTACCGGCAATCCTCATGTCGCTGTCTTGTATATCCGATTGCGAACTCCTCTGCGGCGAAGAAACCTCCGGAGTCTTAACCGTTGATTCAACTGAATACTCCTCCGACCTCGATTCATCATCGCCGTCGTTTTCATTACTCGCCGAGGAGGAATCCATTGCTGTTTTCATCGAACACGAGCGTAAGTTCGTCACTGGATTCGATTACTTTTCAAGATTTCAATCTCACTCTCTAGTTGCCAACGCCAGAGAAGAATCCATTGCATGGATTCTCAAgGTACATGCGTACTATGGATTTCAGCCGTTGACTGCGTATCTTTCTGTTAACTATATGGACCGGTTTTTGGATTCTCGTCCTTTACCGGAATCAAAGGAATGGCCTCTGCAACTTTTATCTGTTGCATGTTTGTCTTTAGCAGCAAAGATGGAGGAACCCCTGGTTCCTTCTCTCTTGGACCTTCagATTGAAGGTGCCAAATACATATTTCAACCGAGAACGATTCTTAGAATGGAGCTACTTATTCTGACTATTTTGGATTGGAGGCTAAGATCAGTCACCCCACTTAGCTTCCTTGGTTTCTTCGCGTGCAAGCTAGATTCAACTGGAACTTTCACTCACTTCATTATTTCACGTGCTACAGAAATCATCTTATCTAATATCCAAGATGCTGGATTTCTTGCTTATACGCCATCATGCATTGCTGCAGCTTCCATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTATGTTAAGCCTGAGCATGCTGAATCATGGTGCGAAGGACTAAGAAAAGAGAAAATTATAGGTTGCTATGAGTTGATGCAAGAAATTATGATAAGCAATAACAGAAGAAATCCCCCTAAATTATTGCCACAATTGCGAGTGACAACTCGAACCCAAAGGTGGTCCAAtatgtcatcatcatcatcgtcatcatccCCATCTTCGTCTTCTTCACCCTCCTTCTCATTGTcttataaaaaaaggaaattaaataaCTGTTTCTGGTTAGATAATGACAAAGGAAACTCagagtga 1059 0.4023 MNDDEPLPAILMSLSCISDCELLCGEETSGVLTVDSTEYSSDLDSSSPSFSLLAEEESIAVFIEHERKFVTGFDYFSRFQSHSLVANAREESIAWILKVHAYYGFQPLTAYLSVNYMDRFLDSRPLPESKEWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFQPRTILRMELLILTILDWRLRSVTPLSFLGFFACKLDSTGTFTHFIISRATEIILSNIQDAGFLAYTPSCIAAASILSAANEIPNWSYVKPEHAESWCEGLRKEKIIGCYELMQEIMISNNRRNPPKLLPQLRVTTRTQRWSNMSSSSSSSSPSSSSSPSFSLSYKKRKLNNCFWLDNDKGNSE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02630 352 Gene3D - 72 189 - -
Tsu03g02630 352 Pfam Cyclin, N-terminal domain 59 188 IPR006671 -
Tsu03g02630 352 SMART Cyclin_C_2 191 322 IPR004367 -
Tsu03g02630 352 PANTHER CYCLINS 22 329 IPR039361 -
Tsu03g02630 352 MobiDBLite consensus disorder prediction 308 332 - -
Tsu03g02630 352 Pfam Cyclin, C-terminal domain 191 292 IPR004367 -
Tsu03g02630 352 SUPERFAMILY Cyclin-like 49 188 IPR036915 -
Tsu03g02630 352 SMART cyclin_7 94 182 IPR013763 -
Tsu03g02630 352 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 22 329 - -
Tsu03g02630 352 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Tsu03g02630 352 CDD CYCLIN 93 181 IPR013763 -
Tsu03g02630 352 Gene3D - 62 255 - -
Tsu03g02630 352 SUPERFAMILY Cyclin-like 172 292 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02630 Tsu-Chr3 32910305 32914620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02630 12 351 Core Cell Cycle Gene Families AT1G70210 56.560 2.72e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02630 K18810 - gmx:100778578 474.167