Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02609 ATGAAAGTCGTGGAAGATCAACCGCCACAACCACTTGACATTGTTCCGGTTCCACTTCAACCGCCACCAATATCAATTGACACCGGACATCATTTTGTGACTGCGGCTAAAGAGGATTCCAAAGATGCTTTGATCAAATGGGCTAAAAATGTAGcacaaaaattgaagtttaccaTTATAGTTAGGAGATCATACAACGGCGGGGATAAGAGTAGGAAACCGTTTTTTGTGTTGGAGTGCGAACGAAGCGGCAAGTATGTGCCACCTAAAAAGAAGTTGAAAGCCGAATCTACGGGAACTAGGAAGTGCGGATGTCCATTCCGACTTCGTGGTTATtatgcaaaagaaacaaagttatGGCATATGACAGTGGTGAATGGCATACACAACCACGAGTTGGACACGGAGCTTGAAGGGCATCTTGTGGCGGGTCGGTTGAAGCCGGAAGAGACGCTATTGGTGAATGAAATGACCAAGAATTTGGTTCCACCAAGAAATATCATCTTGACATTGAAAGAAAGAGATCCCGAGAACACGATGTCATCAAAGCAATGTTACAACGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATATCATCTTGACATTGAAAGAAAGAGATCCCGAGAACACGATGTCATCAAAGCAATGTTACAACGCCCGtatcCGTCGCTTGTTGATGAAGGAGGTGAATATCttcaagatattttctttgcacATCCTAGATCCTTGAGCTTGGTCAACTCTTTTCCCACTGTATTGGTGATGAACTCGACGTACAAaaccaacaagtacaacatgcctttatttgagatagtcgggTTCACTTCAACCGAGAGGACGTATAATGTTGGTTTTGCTTGGCTTACAAacgagaaagaagataatttcattTGGGCTCTACAACAATTGCGGTCACTTGTAAGGAATGAAGGTAGTTTGCCTAAGGTGATTTTGACCGACAGAGATACTGCACTGATGAATGCTGTTGGCCAAGTATTTCCTACATCGGCTGCCATGGTTTGTCGGGTTCATGTTGAGAAAAATGTCGGGTCCAAGATAAAGGAGATAGTGAAATTAAGACAAGGAGAAGAGGTCAAGGAGGAAATTGTGTGGGCGAATTTGGAAAAAGCCTTCATGCATTTGTTATACTCGGATACAATCGACGTGTATGGTGATCGCCTAATGGAGTTTAGGGAGCTATGTAAGATGTGGCCAAGATTGTTGCGCTATATTGAAGAAACAGTTTTGGACACGGACAAAGAGAAGGTTGTCTGTGCTTGGGTAGACAAGCATATGCACATGGGCAACTATACCACAAATAGAGTTGAAAGTACCCATGGTGTCTTGAAAAAATCCTTGACGGACAGTTCTGGTGATTTGGTGAAGGGATGGGAAGCGATACATCACATGTTGGGACTTCAATTCACCGAAGttcaaactcaatttggtcagagTATGTCTGTAGAGGAACACAGATACCGAGATGTTAGACTGTACTCTTTGTTACCTTTCAAAGTTTCTAGAGCGGCATTGGATTACATCTACCAAGAAgcaaatataaacttttaa 1587 0.3812 MKVVEDQPPQPLDIVPVPLQPPPISIDTGHHFVTAAKEDSKDALIKWAKNVAQKLKFTIIVRRSYNGGDKSRKPFFVLECERSGKYVPPKKKLKAESTGTRKCGCPFRLRGYYAKETKLWHMTVVNGIHNHELDTELEGHLVAGRLKPEETLLVNEMTKNLVPPRNIILTLKERDPENTMSSKQCYNAXXXXXXXXXXXXXXKYHLDIERKRSREHDVIKAMLQRPYPSLVDEGGEYLQDIFFAHPRSLSLVNSFPTVLVMNSTYKTNKYNMPLFEIVGFTSTERTYNVGFAWLTNEKEDNFIWALQQLRSLVRNEGSLPKVILTDRDTALMNAVGQVFPTSAAMVCRVHVEKNVGSKIKEIVKLRQGEEVKEEIVWANLEKAFMHLLYSDTIDVYGDRLMEFRELCKMWPRLLRYIEETVLDTDKEKVVCAWVDKHMHMGNYTTNRVESTHGVLKKSLTDSSGDLVKGWEAIHHMLGLQFTEVQTQFGQSMSVEEHRYRDVRLYSLLPFKVSRAALDYIYQEANINF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02609 528 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 520 IPR031052 GO:0006355
Tsu03g02609 528 Pfam Transcription factor AFT 90 133 IPR014842 GO:0000981|GO:0036086
Tsu03g02609 528 Pfam MULE transposase domain 258 354 IPR018289 -
Tsu03g02609 528 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 78 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02609 Tsu-Chr3 32470396 32473515 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu03g02609 MULE 4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02609 - - vun:114181823 338.961