Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02607 ATGGTTTCATCTGATTTGTGCGAGAAATCTTCTGATTTGTTGTCTCAGTACATGAATTACAAAGTTAACAAAACTGTTAATTGGAGTTGTTTTAGTTGCAAGAGTTTTGAGTGTTTAAATGGACCTGGTTGTTCCTCACTTGGATATGGAGCCTTTGAGGAGCTGGGACCCTTCAGAGTAAACTCTGATGGAAAAACACTATATCGAAACCAATATGCTTGGAATGAAGTTGCAAATGTACTCTTCTTAGAATCTCCTGCAGGAGTAGGATTTTCCCACTCAAACACAACTTCTGACTATGACAAGTCAGGAGATAAGAGAACTGCACAGGATGCTTATGTCTTCCTAATCAACTGGCTGGAGAGATTTCCACAGTACAAAACCAGAGATTTTTACATAACTGGAGAAAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCCACTATTATTCAAAACAATATACACTATAAACAAACCATTATTAACCTCAAAGGCATTTCTATGGGGAATGCTTGGATTGATGATGCCACAAGTTTGAAGGGgttatttgattatttatggACTCATGCTTTGAACTCAGATCAAACTCATGAGTTAATTGAGAAGTACTGTGACTTCACTACTGAAAATACTTCAGCAATATGTAACAATGCAACAGATAGGGCTTTAATTGAGAAAGGACGCATAGACTTCTATAACATCTATGCTCCATTGTGTCATGACTCTTCTCTAAAATATAGTTCAACAGGTTATGTAACTAAAGATTTTGACCCTTGTTCTGATTTGTATGGTAATGCCTATCTAAATAGACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGAGCCATTGCAGTCATGTTATTCGTACCTGGAATGACAGTCCAGTTACCATCCTACCCACCATCAAGTATCTCATTGATAGTGGCATTAAATTATGGATATACAGTGGTGATACTGATGCAAGAGTTCCAGTCACATCTTCAAGATATTCAATCAACGCCCTCAAGCTTCCTATCAACTCGGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGGTATGTGGTGGGATACAAAGGATTGACATTTGTCACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGAAAGAGCTTTGACTTTGATCTCATCATTCATCTATGGAGTCTTGCCACCTGTTTCACCATCAAATTAA 1218 0.3826 MVSSDLCEKSSDLLSQYMNYKVNKTVNWSCFSCKSFECLNGPGCSSLGYGAFEELGPFRVNSDGKTLYRNQYAWNEVANVLFLESPAGVGFSHSNTTSDYDKSGDKRTAQDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTIIQNNIHYKQTIINLKGISMGNAWIDDATSLKGLFDYLWTHALNSDQTHELIEKYCDFTTENTSAICNNATDRALIEKGRIDFYNIYAPLCHDSSLKYSSTGYVTKDFDPCSDLYGNAYLNRPEVQKALHAKPTNWSHCSHVIRTWNDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINALKLPINSAWRPWYSGNEVGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGVLPPVSPSN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02607 405 Gene3D - 260 294 - -
Tsu03g02607 405 ProSitePatterns Serine carboxypeptidases, histidine active site. 366 383 IPR033124 GO:0004185
Tsu03g02607 405 SUPERFAMILY alpha/beta-Hydrolases 41 398 IPR029058 -
Tsu03g02607 405 PANTHER CARBOXYPEPTIDASE 40 401 - -
Tsu03g02607 405 Gene3D alpha/beta hydrolase 36 242 IPR029058 -
Tsu03g02607 405 Pfam Serine carboxypeptidase 41 395 IPR001563 GO:0004185|GO:0006508
Tsu03g02607 405 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 401 IPR001563 GO:0004185|GO:0006508
Tsu03g02607 405 ProSitePatterns Serine carboxypeptidases, serine active site. 133 140 IPR018202 GO:0004185
Tsu03g02607 405 Gene3D - 302 396 - -
Tsu03g02607 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 144 IPR001563 GO:0004185|GO:0006508
Tsu03g02607 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 366 379 IPR001563 GO:0004185|GO:0006508
Tsu03g02607 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 70 82 IPR001563 GO:0004185|GO:0006508
Tsu03g02607 405 PRINTS Carboxypeptidase C serine protease (S10) family signature 83 93 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02607 Tsu-Chr3 32446701 32450701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02607 268 396 Calmodulin-binding Proteins AT2G22960 29.412 7.51e-12 62.0