Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu03g02607 | ATGGTTTCATCTGATTTGTGCGAGAAATCTTCTGATTTGTTGTCTCAGTACATGAATTACAAAGTTAACAAAACTGTTAATTGGAGTTGTTTTAGTTGCAAGAGTTTTGAGTGTTTAAATGGACCTGGTTGTTCCTCACTTGGATATGGAGCCTTTGAGGAGCTGGGACCCTTCAGAGTAAACTCTGATGGAAAAACACTATATCGAAACCAATATGCTTGGAATGAAGTTGCAAATGTACTCTTCTTAGAATCTCCTGCAGGAGTAGGATTTTCCCACTCAAACACAACTTCTGACTATGACAAGTCAGGAGATAAGAGAACTGCACAGGATGCTTATGTCTTCCTAATCAACTGGCTGGAGAGATTTCCACAGTACAAAACCAGAGATTTTTACATAACTGGAGAAAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCCACTATTATTCAAAACAATATACACTATAAACAAACCATTATTAACCTCAAAGGCATTTCTATGGGGAATGCTTGGATTGATGATGCCACAAGTTTGAAGGGgttatttgattatttatggACTCATGCTTTGAACTCAGATCAAACTCATGAGTTAATTGAGAAGTACTGTGACTTCACTACTGAAAATACTTCAGCAATATGTAACAATGCAACAGATAGGGCTTTAATTGAGAAAGGACGCATAGACTTCTATAACATCTATGCTCCATTGTGTCATGACTCTTCTCTAAAATATAGTTCAACAGGTTATGTAACTAAAGATTTTGACCCTTGTTCTGATTTGTATGGTAATGCCTATCTAAATAGACCAGAGGTTCAAAAGGCTCTTCATGCAAAACCTACAAATTGGAGCCATTGCAGTCATGTTATTCGTACCTGGAATGACAGTCCAGTTACCATCCTACCCACCATCAAGTATCTCATTGATAGTGGCATTAAATTATGGATATACAGTGGTGATACTGATGCAAGAGTTCCAGTCACATCTTCAAGATATTCAATCAACGCCCTCAAGCTTCCTATCAACTCGGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGGTATGTGGTGGGATACAAAGGATTGACATTTGTCACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGAAAGAGCTTTGACTTTGATCTCATCATTCATCTATGGAGTCTTGCCACCTGTTTCACCATCAAATTAA | 1218 | 0.3826 | MVSSDLCEKSSDLLSQYMNYKVNKTVNWSCFSCKSFECLNGPGCSSLGYGAFEELGPFRVNSDGKTLYRNQYAWNEVANVLFLESPAGVGFSHSNTTSDYDKSGDKRTAQDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTIIQNNIHYKQTIINLKGISMGNAWIDDATSLKGLFDYLWTHALNSDQTHELIEKYCDFTTENTSAICNNATDRALIEKGRIDFYNIYAPLCHDSSLKYSSTGYVTKDFDPCSDLYGNAYLNRPEVQKALHAKPTNWSHCSHVIRTWNDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINALKLPINSAWRPWYSGNEVGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGVLPPVSPSN | 405 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu03g02607 | 405 | Gene3D | - | 260 | 294 | - | - | |
Tsu03g02607 | 405 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 366 | 383 | IPR033124 | GO:0004185 | |
Tsu03g02607 | 405 | SUPERFAMILY | alpha/beta-Hydrolases | 41 | 398 | IPR029058 | - | |
Tsu03g02607 | 405 | PANTHER | CARBOXYPEPTIDASE | 40 | 401 | - | - | |
Tsu03g02607 | 405 | Gene3D | alpha/beta hydrolase | 36 | 242 | IPR029058 | - | |
Tsu03g02607 | 405 | Pfam | Serine carboxypeptidase | 41 | 395 | IPR001563 | GO:0004185|GO:0006508 | |
Tsu03g02607 | 405 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 40 | 401 | IPR001563 | GO:0004185|GO:0006508 | |
Tsu03g02607 | 405 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 133 | 140 | IPR018202 | GO:0004185 | |
Tsu03g02607 | 405 | Gene3D | - | 302 | 396 | - | - | |
Tsu03g02607 | 405 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 119 | 144 | IPR001563 | GO:0004185|GO:0006508 | |
Tsu03g02607 | 405 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 366 | 379 | IPR001563 | GO:0004185|GO:0006508 | |
Tsu03g02607 | 405 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 70 | 82 | IPR001563 | GO:0004185|GO:0006508 | |
Tsu03g02607 | 405 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 83 | 93 | IPR001563 | GO:0004185|GO:0006508 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu03g02607 | Tsu-Chr3 | 32446701 | 32450701 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu03g02607 | 268 | 396 | Calmodulin-binding Proteins | AT2G22960 | 29.412 | 7.51e-12 | 62.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu03g02607 | K16297 | - | gmx:100779407 | 624.009 |