Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02606 ATGAAGAAGGTTTCTCTCTATgcttgtttattactcaaattgagTCTTTTGGTTATTTTTCCTTATAGCAAAGCTAGTCAAGCTGATAAACTTGATGAGTTGATTCTGTCTAGAAGCTCACAAAATCCTCCTAAAACTTTTACTTGGGAAGTGGAAGATACATTGAAATcacaatcttcttcttcttatgtTATACCTCAATTGGGAGAACAGAAAGCCGATAGGATTGTCACATTGCCTGGCCAGCCTTATGGAGTGAATTTTGAACACTACTCTGGCTATGTCACTGTTGATGCTGAGGCTGGCAGAGAACTTTTCTATTATTTTGTCGAGTCTCCATATAACCCTTCAACTAAACCTTTAATATTGTGGCTCAATGGAGGACCTGGTTGTTCCTCACTTGGATATGGAGCCTTTGAGGAGCTGGGACCCTTCAGAGTAAACTCTGATGGAAAAACACTATACCGAAACCAATATGCTTGGAATGAAGTTGCAAATGTGCTCTTTTTAGAATCTCCAGCAGGAGTAGGATTTTCCCACTCAAACACAACTTCTGACTATGACAAGTCAGGAGATAAGAGAACTGCACATGATGCTTATGTCTTCCTAATCAACTGGTTGGAGAGATTTCCACAGTACAAAACCAGAGACTTTTACATAACTGGAGAGAGTTATGCTGGTCATTATGTTCCTCAACTTGCATCCACTATTCTTCAAAACAATATACACTATAAACAAACCATTATTAACCTCAAAGGCATTTCTATAGGGAATGCTTGGATTGATGATGCCACAAGTTTAAAGGGGTTATTTGATTACTTTTGGACTCATGCTTTGAACTCAGATCAGACTCATGAGTTAATTGAGAAGTACTGTGACTTCACTACTGAAAATGTTTCAGCAATATGTATCAATGCAACCAGAAAGGCCATAATTGAGAAAGGACCCATAGACTTCTATAACATCTATGCTCCACTGTGTCATGACTCTTCTCTAAAAAATAGTTCAACAGGTTATGTAACTAAAGATTTTGACCCTTGTTCTGATTTGTATGGTAATGCCTATCTAAATAGACCAGAGGTTCAAAAGGCTCTCCATGCGAAACCTACAAATTGGAGCCATTGTAGTGAAGTTATTCGTACCTGGAATGACAGTCCAGTTACCATCCTACCCACCGTCAAATATCTCATTGATAGTGGCATTAAATTATGGATATACAGGCAAGCTCATGGTGATACTGATGGAAGGGTTCCAGTAACATCTTCAAGATATTCAATCAACACCCTCAAGCTTCCTATCAACTCTGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGGTATGTGGTGGGGTACAAAGGATTGACATTTGTTACAGTAAGAGGAGCAGGACATCTTGTTCCTAGCTGGCAACCAGAAAGGGCTTTGACTTTGATCTCATCATTCATCTATGGAGTCTTGCCACCTGTTTCACCATCAAATTAA 1488 0.3831 MKKVSLYACLLLKLSLLVIFPYSKASQADKLDELILSRSSQNPPKTFTWEVEDTLKSQSSSSYVIPQLGEQKADRIVTLPGQPYGVNFEHYSGYVTVDAEAGRELFYYFVESPYNPSTKPLILWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLYRNQYAWNEVANVLFLESPAGVGFSHSNTTSDYDKSGDKRTAHDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLASTILQNNIHYKQTIINLKGISIGNAWIDDATSLKGLFDYFWTHALNSDQTHELIEKYCDFTTENVSAICINATRKAIIEKGPIDFYNIYAPLCHDSSLKNSSTGYVTKDFDPCSDLYGNAYLNRPEVQKALHAKPTNWSHCSEVIRTWNDSPVTILPTVKYLIDSGIKLWIYRQAHGDTDGRVPVTSSRYSINTLKLPINSAWRPWYSGNEVGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFIYGVLPPVSPSN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02606 495 Pfam Serine carboxypeptidase 80 485 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 PANTHER CARBOXYPEPTIDASE 19 491 - -
Tsu03g02606 495 SUPERFAMILY alpha/beta-Hydrolases 71 488 IPR029058 -
Tsu03g02606 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 456 473 IPR033124 GO:0004185
Tsu03g02606 495 Gene3D - 347 381 - -
Tsu03g02606 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Tsu03g02606 495 Gene3D alpha/beta hydrolase 70 329 IPR029058 -
Tsu03g02606 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 491 IPR001563 GO:0004185|GO:0006508
Tsu03g02606 495 Gene3D - 389 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02606 Tsu-Chr3 32437668 32440953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02606 355 486 Calmodulin-binding Proteins AT2G22960 26.471 4.81e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02606 K16297 - gmx:100779407 793.882