Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02605 TGATCTTATTCCTAGCTGGAATGACAGTCCACTTACCGTCCTACCGACCATCAAGTATCTCATTGAAAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTTCCAGTCACATCTTCTAGATATGCAATCAACAAACTCAAACTTCCTATCAACTCTGCTTGGCGTCCGTGGTATTCAGGAAAAGAGATTGGAGGGTATGTGGTGGGATACAAAGGATTGACATTTGTTACAGTAAGAGGAGCAGGACATCTTGTTCCAAGCTGGCAACCAGAAAGAGCTTTGACTTTGATCTCATCATTCCTCTATGGAAGTTTGCCTACTGTTTCACCATCAAATTAA 352 0.4148 DLIPSWNDSPLTVLPTIKYLIESGIKLWIYSGDTDARVPVTSSRYAINKLKLPINSAWRPWYSGKEIGGYVVGYKGLTFVTVRGAGHLVPSWQPERALTLISSFLYGSLPTVSPSN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02605 116 ProSitePatterns Serine carboxypeptidases, histidine active site. 77 94 IPR033124 GO:0004185
Tsu03g02605 116 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 5 112 IPR001563 GO:0004185|GO:0006508
Tsu03g02605 116 Pfam Serine carboxypeptidase 7 105 IPR001563 GO:0004185|GO:0006508
Tsu03g02605 116 SUPERFAMILY alpha/beta-Hydrolases 5 108 IPR029058 -
Tsu03g02605 116 Gene3D - 13 107 - -
Tsu03g02605 116 PANTHER CARBOXYPEPTIDASE 5 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02605 Tsu-Chr3 32392464 32409725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02605 6 108 Calmodulin-binding Proteins AT2G22960 28.846 9.79e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02605 K16297 - gmx:100779407 193.356