Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02597 ATGTCTGAAATGAGATTTCTTAAATTCTATTATGGGAAGTGCAATGTGACAAGTAATAGATATCTTCCGGACGGTTTGGATTCATTGTCTGACAAATTGAGGTACCTTGAATGGCATAGATATTGTCTAAAGTCTTTGCCATCAAAATTTAGTGCCAAATTGCTTGTTGAGCTTTCCATGCCTTACAGCAACCTTCAAAAGCTATGGGATGGTGTTCAGAAATTGAAGATGATTGATCTACACAATTGTGACAATCTTGTTGGTTTTGGGAAAAATGAAAACTATATAGAAATTGGTTCTCTTAGTACTCTGGTTCTTTCTGGCTGCAAAAAACTCAATGCATCAAATCTTTGTTTCAACTTCGAAGGGCAATCAACTTTAACATCATTGGTTCTGGAAAACTGTTGCAATTTAGAGGCACTCCCCGATAGCATTGGTTTATTATCATCATTGCAATGCTTAAGACTAAGCGGAAGCAATGTTGAGAGATTGTCACCAAACATAAAAAACCTTAACAGCCTTAAAGAGCTAAGGTTAGACAATTGCAAGAAACTCATGTTTGTGTCTGTTTCTGAGCTTCCACCGTCACTGAGATTGTTTAGTGCTATTAATTGCATTTCATTAGTCTCGGACCTTACTACATTGGACTTACCCTTTGAACATAGAACTAAACCTCAACCATATCCTCAATCTGTgttcttccctggagctcatgTTCCTAAGAGATTTAGTTTTTGTTCTGAAGAAAATCATCACGGTTCCGCTTCTACGGTAACTATTAGGCATCTTCCAGAAACTGGTTTATATGGTTTAGTGCTTTGCGTCGTTCTTTCAGAGTCAATTGACAAAGAAATACAAGAAAGTGGAGCATGGGATAATCCTTACAACATATCCTTTGAATTTTCACTTGAAAATGAGGAGGGAGAATGGTCAACAGAGAGGATAAAGGGTTGTGGGGTGTTCCCACTTTATCACTTAGAAGAatctaacaattttaaaaagatgAATGAGTTGCATGTCAGAACAATTGGATgtgataatgaaaatgaagagaatGAGACTAAGAAATTGCATCAAACTATTGTGACTCACATTCAAGATGAAAAACTCGACTCCAATAAAACATCTTCCTCTCACATTTTTTTAGTTCCAACAGAAAATGGTTGCAAGACAAAACCACAAGGTTTGGAGGAATATGATTTCTATACAAATACAAGTTCAATACCACAAAATCAATTTGATACTGCAAGAGCTTCCAATATTATGAATCCAAATCAGATCATTGAAATggtgtcaaaagaaaaagactTGACCAATACGCAACTCGAACAAGATTCTTGGGATCCAATTTCAGAGCTAGAGAGTTTGTTATGTGACAGTTATGATTTGTCTCCCATGTGCCCCGACTCAACAACTGTTTCGGTACTCGAAGATCCAAATATGGCAACAATTCTTGAAAATTTAGAAACCCTTTTGGAGACACCACTTGAAATTCTCTATTCAGACAATGAAGTGAAGCAAAAGTTCCATCAAATTCTGGAACAACTTGGTCAATTTGAAAACCAAATCCCTGTTAGGCTTCATCATGTTATTTCCAAGTTAAGAACTTTCATTGAAGGGGTTGATGTAAGATTTGTGAGTGCTCAAAAAACTATACAAGATTATGATCAATTGCTTCAATCAAGGTCTCTTATATCAAAGAAATTGGAAAGTGCCAAAGCCAGAGAAAAGCAAAATAATTGTGAAATATCTCGAGGCAAAATACAATTTGAAAAGATCAATTCTGAGATTTTTGAATTAGAACAAAGATTAAGTGGTCTTGTTGAGATTAGAGACAAGATGAAGAGAGATTTGGAGCAATATGAAATGATAAATAACAAGATTAAGACAGAGGTTGCACAAGATTGGGTTCCACAGTGCAGGATTGTCTTAACAAATTTGAAAAGGTATGAGACTTCTTACAAAGTGGCCTTAACAAACAAGAAGAAACTTGAAGATTTGATATCTCAATTCATGCATATCATAACATTTATCAAATACATTCATGTTTAA 2052 0.3397 MSEMRFLKFYYGKCNVTSNRYLPDGLDSLSDKLRYLEWHRYCLKSLPSKFSAKLLVELSMPYSNLQKLWDGVQKLKMIDLHNCDNLVGFGKNENYIEIGSLSTLVLSGCKKLNASNLCFNFEGQSTLTSLVLENCCNLEALPDSIGLLSSLQCLRLSGSNVERLSPNIKNLNSLKELRLDNCKKLMFVSVSELPPSLRLFSAINCISLVSDLTTLDLPFEHRTKPQPYPQSVFFPGAHVPKRFSFCSEENHHGSASTVTIRHLPETGLYGLVLCVVLSESIDKEIQESGAWDNPYNISFEFSLENEEGEWSTERIKGCGVFPLYHLEESNNFKKMNELHVRTIGCDNENEENETKKLHQTIVTHIQDEKLDSNKTSSSHIFLVPTENGCKTKPQGLEEYDFYTNTSSIPQNQFDTARASNIMNPNQIIEMVSKEKDLTNTQLEQDSWDPISELESLLCDSYDLSPMCPDSTTVSVLEDPNMATILENLETLLETPLEILYSDNEVKQKFHQILEQLGQFENQIPVRLHHVISKLRTFIEGVDVRFVSAQKTIQDYDQLLQSRSLISKKLESAKAREKQNNCEISRGKIQFEKINSEIFELEQRLSGLVEIRDKMKRDLEQYEMINNKIKTEVAQDWVPQCRIVLTNLKRYETSYKVALTNKKKLEDLISQFMHIITFIKYIHV 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02597 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 70 IPR044974 GO:0006952
Tsu03g02597 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72 284 IPR044974 GO:0006952
Tsu03g02597 683 Pfam Leucine Rich Repeat 55 73 IPR011713 -
Tsu03g02597 683 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 72 284 - -
Tsu03g02597 683 Gene3D Ribonuclease Inhibitor 1 226 IPR032675 -
Tsu03g02597 683 Coils Coil 611 631 - -
Tsu03g02597 683 Coils Coil 647 667 - -
Tsu03g02597 683 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 70 - -
Tsu03g02597 683 SUPERFAMILY L domain-like 21 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02597 Tsu-Chr3 32279712 32283173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02597 1 204 WRKY Transcription Factor Family AT4G12020 29.856 5.39e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02597 - - gsj:114380057 523.857