Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02528 ATGCCTAAAAAGGGAATGCTTTTTGATAACATCAATGATGCTTGGAAGTTTTGGATTGATTATGGGGGAAGAATTGGGTTTGGAGTGAGAAAACAATATACGCACCATAGCAAGGACGGCTCAGGCTTAGCTAATTCTTGTAGGTTCGTGTGTTGCAAAGAAGGCTTACGAAAACCGGACAAAGGAGATTTTAAAACAATCAAGCCAAGACCAGAGACGAGAACTGGCTGTCAAGCAAGGATATGTCTTAAGAATATGGGTGAAAATTGGATGCTCTTTGATTATGGATATTTTGGTGATGTGGTTTCTCTTGATTCAACATATTGCACAAATAGTTCACATAGACCGCTAGCGGTGTTCTCGGGATTTAACCACCATCGAAAAGCGGTGATCTTTGGGGCTGCATTATTGTACGACGAAACTGCAGAGTCGTACAAGTGGCTTTTTGAGACGTTTCTAGAGGAACATAAGCAAAAAACGCCTCGAACAGTTTTTACTGATCAAGATCAAGCAATGGCAAAAGCATTGTCCAGAAAGTTGGAGACCCTTGTTGTAAACTACAATGCTGAGGAAGACCCGTGGTTGAGAAGAGCATATAGTTTGAAGGAGAAATGGGCTTCTTGTTATATGAATAAGGCTTTTACATTAGGAATGCGAAGCACCCAACTTAGTGAAAGTGTGAATGCAGACATCAAGAATTTTATGAATGTGGATTTGGATATAATCAAGTTTTTAAAACGCTTTGAGGACGTTGTAGAAGAAAAGAGATATAACGAATTGAGAGTCTTTATTCATATGGATGTGAAATCGGTGTCTGTACCTTATATCATGAAGAGGTGGACAAAGTCTGCAAGAAGTGGTGAATTACCAATTATTGGTGTTAGTCATGTGGTGGGAGATATTGATTTGTCCCGAAAGCAACGGATTGCTAGTGAGGCATGTAGAAGTCCGGAAACATTCACCTTTATTACCAAAGTTGTTGATGAATTGGAGAGGCAAatactaaaatttcaaaatagtcAAGTAAGTAATGCTCAAGTGAATGAGTTTCTTAGCACAATTGAAGAAATCGAAAATGGCATTGATGGTTCAACACAAaaaaatggTGGTTCAAGTGCTTCACAAATTAagAACAACAATGGAATGGTAAAGGGTCAACCGgccaaaaacagaaaaaatgaTGACTTAAGTGATTCACAAAGACATGTGCAATCTATGGTGTCTAATACAAGTGCACCCATATGGCTCAATGATGTATACAACAATATGCAAGAAAGCAATGAGGATACCACAACAATGATCAATTCATAA 1311 0.3738 MPKKGMLFDNINDAWKFWIDYGGRIGFGVRKQYTHHSKDGSGLANSCRFVCCKEGLRKPDKGDFKTIKPRPETRTGCQARICLKNMGENWMLFDYGYFGDVVSLDSTYCTNSSHRPLAVFSGFNHHRKAVIFGAALLYDETAESYKWLFETFLEEHKQKTPRTVFTDQDQAMAKALSRKLETLVVNYNAEEDPWLRRAYSLKEKWASCYMNKAFTLGMRSTQLSESVNADIKNFMNVDLDIIKFLKRFEDVVEEKRYNELRVFIHMDVKSVSVPYIMKRWTKSARSGELPIIGVSHVVGDIDLSRKQRIASEACRSPETFTFITKVVDELERQILKFQNSQVSNAQVNEFLSTIEEIENGIDGSTQKNGGSSASQIKNNNGMVKGQPAKNRKNDDLSDSQRHVQSMVSNTSAPIWLNDVYNNMQESNEDTTTMINS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02528 436 Pfam MULE transposase domain 101 178 IPR018289 -
Tsu03g02528 436 Pfam FAR1 DNA-binding domain 16 86 IPR004330 -
Tsu03g02528 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 86 IPR031052 GO:0006355
Tsu03g02528 436 PANTHER OS01G0607050 PROTEIN 2 86 - -
Tsu03g02528 436 MobiDBLite consensus disorder prediction 361 408 - -
Tsu03g02528 436 MobiDBLite consensus disorder prediction 361 386 - -
Tsu03g02528 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 180 IPR031052 GO:0006355
Tsu03g02528 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 181 260 IPR031052 GO:0006355
Tsu03g02528 436 PANTHER OS01G0607050 PROTEIN 91 180 - -
Tsu03g02528 436 PANTHER OS01G0607050 PROTEIN 181 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02528 Tsu-Chr3 30214161 30216297 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu03g02528 MULE 1.9e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02528 - - ccaj:109790316 265.003