Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu03g02498 | ATGACTATTCAACAAACCATAgatgattcttcttcttcttcatcatcttcttctacAGTGGTATCTTTGAAAAAGTATGATGTTTTTATAAACTTTCACGGTGAGGATACTCGTAAAAATTTCACAAGCCATCTACAAGCTGCTCTGAGCAAAGAAGTTATAACCTTTATTGACGAAAATGAGCTTGAAAAAGGAGATGAGATCTCGTCAGCACTAATCAAAGCCATTGAGGAGTCATATGTATCTATAGTCATCTTTTCAGAAGACTACGCTTCTTCAAAATGGTGCTTGAATGAACTTGTCAAGATTCTAGAATGCAAAAAAGACCAGGGACAAATTGTGATACCTATTTTCTACAAAGTAAATCCATCGCATGTGAAATTACAGATTGGGAGTTTCGGGCTAGGTTTCGTAAAACATGAACAATATTTAAAGTACAATAAAGTTAAGTTGCACAAATGGCAAGATGCTCTCAAAGAAGCAGCCGAGTTAGCTGGATGGCACTCCGAAAATTACCTGATTGAATTAGATTTCATCAAGGACATTGTTGAAGAGGTTGTTACACAATTGAATCGGAAACTCCCATCTGAAGTTAATAAGGAAATTGTTGGAATTGAGAAAAAGTATAAAGAGATTGAATTGTTACTGAAAATTGAATCAGCTGATGTGAGAACCCTTGGCTTATGGGGCATGGGTGGCATAGGGAAGACCACTCTAGCTGAATATGCATGTGTTAAACTGTCTTTTCAATTCGAACGTCGTTGTTTGTTGGACAATGTAACGAAAGTATCTAAAGAGTGCGGACCCTCAGGTTTACATAAACTTTGTCTTTCTAAATTGTTTGAGCTTCCACTTAATGAACCTTATGTCGAAACTCGAATTTCAGACAGAAGACTTGCAGGTGAAAAAAGTTTAATTGTGTTGGATGATGTAGCAACTTTAGAGCAAGCAGAAAATCTTAAAATGTGCTTGAGATCGGGTAGTAGAGTCATTGTCACAGCTAGAGACAAGCAAATATTTAGTCAGTTCAATGAATGTGAAATTTATGAGGTTAAAGGACTGAACGAAGATGACTCTATTCAACTATTCTGTTGGCATGCTTTCCAGAAAAAATATGCTCAAGTTGGATATGAAGAACTCTCAGAAAGGGCAATTGGGTATTGCGGAGGCAATCCTCTAGCTTTAAAAGTGTTAGGTGCAAATTTCCGTACAAAAAGCAAACAAGTGTGGGAAAGTGAACTGGAGAAGCTCAAAAAGATTCCTAATATGAGTATTCACAATGTGTTAAAATTGAGTTTCGATGACTTAGATCGTAAAGAACAGGACGTATTTCTAGACATTGTATGCTTCCTCAGCTTAAGATTTTCCAGTTTTGATTCTTATCATAAACGAGATTACCTAACAGTTCTATTCGATGCTTGCGAGTTTTATGCGGTATGTGGGATAGAAGCCCTCCTACGTAAAGCGCTCATTGcggttaatttttattatagtgGTGATATAATTAAAATGCATGATTTGTTAGTAGAAATGGGACGAGAGATTGTTAAGCAAGAATCTCCTGAAAACCCCGGAAGAAGAAGTAGATTGTGGGATTCTGAGGATGTGTATGATGTATTGAAATATAACAAGggaACTGAAGCtgttgaagttttattttttgatatttcCAAAATTGAGAATCTATCTTTGAGCTCTGATTCCTTTAAAAGCATGATCAACTTAAGATATCTTCATATCACCAGTTATACACACCTTCCTAAAGGTCTTGAGCAGTTGTCTGATAAATTGAGGCACCTTTATTGGGATCTATTTCCACTTGCGTCTTTGCCATCGTCCTTTTGTGCTGAAAATCTTGTTATACTTAGCATGCGACATAGCAAGCTTAGAAAGCTTTGGAATGGAGTTCAGAAGTTGGACAAATTAATTACTCTTGATCTATGTAACTTCAGAGACCTGATTGAGATCTCAGACCTATCAAGGGCACCAAATCTTCAAAAAGTGGATCTTTCTGGTTGTGTGAGTCTCCGTCAACTCCATCCATCCGTTTTCACTCGCCCCAAGCTTAGAGAACTATCTTTAATTGGTTGCAAATTTCTTGAGAATAGGCAGCGCAAGGATCCAATTGAAACGACGACGGTAGAGGTGTGCTATGGAATTCGACAAACTGTTTGTGATTTAGAAGGAATTGGCTTGGAGGTGGTGTTGTCTCAACCTGTTGAAGATTGTGAGGTGGGGAATTGCTCGTTGGTTCCTTGTTCTCTTGCGAGTAGGGGGGTGGTTGGCAACTCAATTGGATATATGTTAGCGGGGGAGCAACTGCCTCTAGCTCCAGGGGTGTCTATCCCAGGTACCTTGGTTGATAAAGAGAGAGGGGATGCTCATCATATTATTGATATTCAGGAAGATTTGGGGATGAACTTTCATGGGGAGGGTGATGAGGATGTGGTTAGAAGTATGGGGTATGAAGGAAGGGATAAACAGGAGAAGGCCGATTGGGTGAATGGTCAAGGTTATCAATGA | 2523 | 0.3757 | MTIQQTIDDSSSSSSSSSTVVSLKKYDVFINFHGEDTRKNFTSHLQAALSKEVITFIDENELEKGDEISSALIKAIEESYVSIVIFSEDYASSKWCLNELVKILECKKDQGQIVIPIFYKVNPSHVKLQIGSFGLGFVKHEQYLKYNKVKLHKWQDALKEAAELAGWHSENYLIELDFIKDIVEEVVTQLNRKLPSEVNKEIVGIEKKYKEIELLLKIESADVRTLGLWGMGGIGKTTLAEYACVKLSFQFERRCLLDNVTKVSKECGPSGLHKLCLSKLFELPLNEPYVETRISDRRLAGEKSLIVLDDVATLEQAENLKMCLRSGSRVIVTARDKQIFSQFNECEIYEVKGLNEDDSIQLFCWHAFQKKYAQVGYEELSERAIGYCGGNPLALKVLGANFRTKSKQVWESELEKLKKIPNMSIHNVLKLSFDDLDRKEQDVFLDIVCFLSLRFSSFDSYHKRDYLTVLFDACEFYAVCGIEALLRKALIAVNFYYSGDIIKMHDLLVEMGREIVKQESPENPGRRSRLWDSEDVYDVLKYNKGTEAVEVLFFDISKIENLSLSSDSFKSMINLRYLHITSYTHLPKGLEQLSDKLRHLYWDLFPLASLPSSFCAENLVILSMRHSKLRKLWNGVQKLDKLITLDLCNFRDLIEISDLSRAPNLQKVDLSGCVSLRQLHPSVFTRPKLRELSLIGCKFLENRQRKDPIETTTVEVCYGIRQTVCDLEGIGLEVVLSQPVEDCEVGNCSLVPCSLASRGVVGNSIGYMLAGEQLPLAPGVSIPGTLVDKERGDAHHIIDIQEDLGMNFHGEGDEDVVRSMGYEGRDKQEKADWVNGQGYQ | 840 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu03g02498 | 840 | Gene3D | - | 23 | 188 | IPR035897 | - | |
Tsu03g02498 | 840 | SMART | till_3 | 25 | 164 | IPR000157 | GO:0007165 | |
Tsu03g02498 | 840 | Gene3D | - | 189 | 349 | IPR027417 | - | |
Tsu03g02498 | 840 | Gene3D | Ribonuclease Inhibitor | 539 | 711 | IPR032675 | - | |
Tsu03g02498 | 840 | ProSiteProfiles | TIR domain profile. | 24 | 190 | IPR000157 | GO:0007165 | |
Tsu03g02498 | 840 | Pfam | Leucine Rich Repeat | 618 | 637 | IPR011713 | - | |
Tsu03g02498 | 840 | Gene3D | - | 353 | 437 | IPR042197 | - | |
Tsu03g02498 | 840 | Pfam | NB-ARC domain | 213 | 419 | IPR002182 | GO:0043531 | |
Tsu03g02498 | 840 | PRINTS | Disease resistance protein signature | 225 | 240 | - | - | |
Tsu03g02498 | 840 | PRINTS | Disease resistance protein signature | 388 | 402 | - | - | |
Tsu03g02498 | 840 | PRINTS | Disease resistance protein signature | 660 | 676 | - | - | |
Tsu03g02498 | 840 | PRINTS | Disease resistance protein signature | 298 | 312 | - | - | |
Tsu03g02498 | 840 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 18 | 702 | IPR044974 | GO:0006952 | |
Tsu03g02498 | 840 | Pfam | TIR domain | 25 | 204 | IPR000157 | GO:0007165 | |
Tsu03g02498 | 840 | SUPERFAMILY | "Winged helix" DNA-binding domain | 425 | 541 | IPR036390 | - | |
Tsu03g02498 | 840 | SUPERFAMILY | L domain-like | 554 | 699 | - | - | |
Tsu03g02498 | 840 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 18 | 702 | - | - | |
Tsu03g02498 | 840 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 184 | 447 | IPR027417 | - | |
Tsu03g02498 | 840 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 167 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu03g02498 | Tsu-Chr3 | 29550819 | 29589832 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu03g02498 | 22 | 702 | WRKY Transcription Factor Family | AT4G12020 | 32.249 | 1.84e-82 | 288 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu03g02498 | - | - | mtr:MTR_2g037140 | 798.119 |