Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02497 ATGGTGGTCGAGCCCGTTCACATGTCTAGGCCTGATGTAACTTGTTCTTATAATTTCGATCTTGAAGACTTACTTAGAGCTTCAGGAGAAGTTCTTGGAAAAGTTAGCTATGGCAGCTCATATAAGGCTACTTTATTATTGGAGGAGGAGGAGGCAATGATAGTTGTGGTGATAAGGTTGGAAGAAGTTGTGGTAGGCAAAAAGGAGTTTGAACAACATATGGAGATTTTGGAAAGGGTCGGACAACACACAAACGTTGTGCCACTTGGCGCTTATTATTTTTCGAAAGATgaaaaaattatggtatatgaCTATGTCCCAGCTGCCAACTTATCGACACTCTTGCATGGAAGTCGATCGGGTGGAAGAACTCCATTAGATTGGGACTTGAGAGTAAAAGTTTCTCTTGGAACTGCAAGAGGAATTGCGCACATCCATTCTGTTGGAGGTACGAAATTCACACATGGAAATATCATGTCCTCAAATGTCCTCCTCAACCAAGATAACGACGGTTGTATTTCTGATTTTGGCCTGACTTCACTTATCAATGTTCCTGCAAACCCTTCTAGACCTGCAGGTTACCGCGCTCCTGAGGTGATTAAAACCGGTAAGCACTCTCATAAATCAGATGTCTACAGCTTTGGTGTCCTCCTTCTCGAATTGCTTACAGGTAAAGTGCCTCTACAATCTCCTGGACATGATGATATGGACATTGATCTCCCTAGGTGGGTTCACTCTGTTGTTCGGGAGGAATGGACAGCCGAGGTTTTCGATCTTGAGCTAAAGATGTAG 792 0.4268 MVVEPVHMSRPDVTCSYNFDLEDLLRASGEVLGKVSYGSSYKATLLLEEEEAMIVVVIRLEEVVVGKKEFEQHMEILERVGQHTNVVPLGAYYFSKDEKIMVYDYVPAANLSTLLHGSRSGGRTPLDWDLRVKVSLGTARGIAHIHSVGGTKFTHGNIMSSNVLLNQDNDGCISDFGLTSLINVPANPSRPAGYRAPEVIKTGKHSHKSDVYSFGVLLLELLTGKVPLQSPGHDDMDIDLPRWVHSVVREEWTAEVFDLELKM 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02497 263 PANTHER LRR RECEPTOR-LIKE KINASE 15 261 - -
Tsu03g02497 263 SUPERFAMILY Protein kinase-like (PK-like) 29 261 IPR011009 -
Tsu03g02497 263 Pfam Protein tyrosine and serine/threonine kinase 29 230 IPR001245 GO:0004672|GO:0006468
Tsu03g02497 263 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Tsu03g02497 263 PIRSF ILK 2 239 - -
Tsu03g02497 263 PANTHER OS05G0588300 PROTEIN 15 261 - -
Tsu03g02497 263 Gene3D Transferase(Phosphotransferase) domain 1 107 263 - -
Tsu03g02497 263 ProSiteProfiles Protein kinase domain profile. 26 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02497 Tsu-Chr3 29547155 29548419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02497 15 261 Receptor kinase-like Gene Family AT5G58300 69.636 1.10e-123 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu03g02497 PK_Tyr_Ser-Thr 1.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02497 - - gmx:100796171 398.282