Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02482 atgataAAACAAGAATCCAGATTCATCTCCTTCATTTCTCTATGCTTCTTCTTCACCTTACTATCTTCAATCCCATCCATATCAGACTCCAAATGCACAAAAGGCTGCTCCCTTGCTTTAGCCTCCTTCTATGCAGCTAAAGGCTCCAACCTCACATATATTTCAAGTATTATGAAATCCTCAATTCTTACAAGACCAGAAGATATAGTCGATTACAACCACGAAATAATACCTAATAAAGACAGCTTTATAGGTGATCAAAGAATCAACCTCCCATTCCCATGTGATTGCATAGAGAATGAGTTTCTCGGTCACACGTTTAGTTACGATGTTCAAACGGGTGACACGTATGAAACTGTTGCCGTAACTAACTATGCTAATCTAACTAATGTTCAATGGTTGCAGAAGTTTAATAGTTACAGACctaataatattcctgatactGGAACGTTGAATGTTACTGTTAATTGTTCTTGTGGTGATAGTGATGTTGCAAATTATGGGTTGTTTGTTACTTATCCTCTTAGACCTGGTGAGACTTTGGGGACGGTTGCGAATTCGACTAAAATTGATTCGTCGTTGCTGCTGAGGTATAATCCTGGTGTGAATTTCAACCAAGGGAGTGGTCTTGTTTTTATTCCGGGAAAAGATCAGAATGATAGCTTTGTGTTTTTGAGTTCCAGTTCAGGAGGTCTTGCTGGTGGAGCTATTGCTGGAATAGCTGTTGGAATAGTGGTTGTTCTGTTATTGGCAGCTGGTATATATTTTGGATACTTCCGGAAGAAGAAGGAGGAACTTTTTTCGCGAGACTCCACTGCACTCTTTTCTCAAGATGGGAAGGATGAAAATTCTCGTAGTTCCGCGAACGCAATGCCAGGGCATGGTGTGATGACAGGCATAACTGTCGACAAATCAGTTGAATTCTCATACGATGAACTAGCAGCTGCGTCAGATAACTTTAGCATGGCTAATAAAATTGGTCAAGGAGGTTTTGGCTCTGTCTATTACGCAGAGCTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCAACAAAGGAATTTCTTGCTGAATTGAAAGTCCTAACACGTGTTCACCATCTTAACTTGGTGCGGTTGATTGGATATAGTATTGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTGAGTCAGCATTTGCGTGGTTCAGGTAGAGATCCACTTCCATGGGCTACACGTGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATCCATGAGCATACGGTGCCTGTATATATTCATCGTGACATAAAGCCAGCAAATATATTGATAGACAAAAACTTCCGGGGAAAGGTTGCTGATTTTGGTTTAACCAAACTGACGGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTTGGCACATTCGGATACATGCCACCAGAGTATGCTCAATATGGAGACGTTTCTCCCAAAGTAGATGTTTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCGGCAAAGGAAGCAATCGTCAAGTCGAGCGAATCTATTACTGCAGACTCAAAGGGACTTGTTGGTCTGTTTGAAGGAGTTCTTAGTCAGCCCGATCCTACAGAAGATCTTCGCAAACTAGTGGATCCAAGGCTTGGAGATAACTACCCTGTAGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCGTGTACGCAAGAAAATCCTCAACTGCGTCCAAGTATGAGATCCATTGTAGTTGCTCTTATGACACTTTCTTCATCTACGGACGATTGGGATGTTGGTTCCTTTTACGAAAATCAAAATCTTGTGAATCTCATGTCAGGAAGATAG 1863 0.4112 MIKQESRFISFISLCFFFTLLSSIPSISDSKCTKGCSLALASFYAAKGSNLTYISSIMKSSILTRPEDIVDYNHEIIPNKDSFIGDQRINLPFPCDCIENEFLGHTFSYDVQTGDTYETVAVTNYANLTNVQWLQKFNSYRPNNIPDTGTLNVTVNCSCGDSDVANYGLFVTYPLRPGETLGTVANSTKIDSSLLLRYNPGVNFNQGSGLVFIPGKDQNDSFVFLSSSSGGLAGGAIAGIAVGIVVVLLLAAGIYFGYFRKKKEELFSRDSTALFSQDGKDENSRSSANAMPGHGVMTGITVDKSVEFSYDELAAASDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKSSESITADSKGLVGLFEGVLSQPDPTEDLRKLVDPRLGDNYPVDSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSSTDDWDVGSFYENQNLVNLMSGR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02482 620 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02482 620 Pfam Protein tyrosine and serine/threonine kinase 322 591 IPR001245 GO:0004672|GO:0006468
Tsu03g02482 620 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Tsu03g02482 620 Gene3D Phosphorylase Kinase; domain 1 296 390 - -
Tsu03g02482 620 SUPERFAMILY Protein kinase-like (PK-like) 302 592 IPR011009 -
Tsu03g02482 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 620 IPR044812 GO:0019199|GO:0045087
Tsu03g02482 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Tsu03g02482 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 15 620 - -
Tsu03g02482 620 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02482 620 Gene3D Transferase(Phosphotransferase) domain 1 391 611 - -
Tsu03g02482 620 CDD STKc_IRAK 326 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02482 Tsu-Chr3 29313606 29321044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02482 12 620 Receptor kinase-like Gene Family AT3G21630 59.903 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu03g02482 PK_Tyr_Ser-Thr 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02482 - K13429 gmx:100777781 931.398