Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02473 ATGTTCGTAGCGGCTGTCCAAAATGGTTTGAAAGCTGGTCACTTTAACGAGTCGCTGGCGCAAAAACCGGCGAGCACGATGCAAGAGGTTATGAAAAGGGCAGAATGCTACATCAAGGGAGAGGAAAGCAACGCGGAGAAGAGAAGCAGGGACTCGAGAGAGAAGCCTTCCAGCCGAAGGTCTCCAGAGCGATACAACAGAGGAAACAGTCAACGGAGTGGCCGTTATGAGGATAAAGGCGCTGGAAGGTACCGTCAACCATGGCGGAGCAACGAAAGGACCTATAGAGCACGAGAGGAATACACAGAGTTAAACGACTCGAAAGTGCACGTACTGGACGAAATTCTGAGTTCAGGGCTGGCGAGACTACCCCCTGCACCGGATAGCAATGCGAGGATGGGTGCTAATGAGAACGCATGGTGTCATTACCACAGGGCGAAGGGGCACGACAATGAAAAATGCTACCGGCTAAAAGATTTGATAGAGAAATTGATAAGCAGTGGTCACCTGCGGAAATTCCTCGAACGAGCAGCCAAAGGCGACTTGAACAAACGCTCACCCCCTCGCTCCCCAAGAAGATCACCTCCAAGAGAGGGTGATGAGAAGGAACCTAAGAGGATCGCAGTCAACACGATAGCCGGAGGGTTCGCGGGAGGAGGCGAGTCCAAAGCAGCCAGAAAGCGATACCTCAGGAGGATCATCCAAGAAACAAACACGGTGGCACACGTATCTTCTTCAAGAGTCCCCAAAATTTCATTCTCACCCAGTGATGGAGAAGGCGTGTTCCCCCACGACGACGACCCTCTGGTAATCCAAGTCCAAATACTAAACTGCGATGTGAAGCGAGTTCTAATAGACTCCGGCAGCTCGGCAAACATCATGTACTGGGAGGCTTTCAAAGCCATGCAATTAGCAGGAGAGCAGTTGCAGCCATACAATGGAACTTTGGTAGGTTTCGGAGGCGAGCATGTAGAAATTCATCTAGCCAAGTTTGAGCAACTCAATATGGACCTTTTTAAAAAGTGTTTGGAGACTGTCGAAAGTTGTCTTAGTGATGCTAAGATCAACAAGAGTAGTGTGGATGATATTGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTTCAACAGCTATTGCAAGACTTTTTCAAATGGAAGGAACTTTGTGCGAGCATCAATCCGGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAAGCTGCTTTGCTTTGTGAAGGCATTGGGAAGTCACTAAGCTTGGTTTTGAGAGATGTCACCCCGTTGTCTCTAGGTAAGTCAGTTAGAGGAGATGTAATGAATATAGTGATTCCTATAAACACCTCAATTCCTGTGAAGATGACAAAAGAATATGTTACAATCAAAGATAATCAGTCCCGTATCACGGTTAGGGTTTACAAGGGTGAGAGATTGAAAGCTAGTGAGAACAACTTGTTAAGTTCATTTAAGTTCTCAATTCCTCCTGCTCCTCGTGGCCATATTCCTATCAAAGTAACTTTTTCTATAGATCTTGATGGCATTTTAAACGTCTCTGCAAGGGAAGATACTGGCGGGAATAAGCAAGATATTACAATAACAAATGAAGAGGGAAGGCTTTCAACTGATGATGTTGAGAGAATGATTCAAGAAGCTGAGTTTTTCAAAGCTGAAGACATGAAGCACATGAAGAAGGTTAAAGCAATGAATGCTTTGGATGATTATCTTTATGACATGAAGAAAGTTACGAAGGATGAAAGTGTAACATCCATGCTCACTCCTTTAGAGAAAGTGAAGATCAATTCTGCAATGATAAAGGGAAAGAATTTGATTGAAGGAAAACAGAACCAAGATGCATTTGTGTTTGTGGACTTTCTGAAAGAGCTTGAGAGCACATTTGAATCCACTTTGAACAAGGTCAACAAAAGCTACTTTGATGAGGATAGTGATTCTGATTAA 1950 0.4482 MFVAAVQNGLKAGHFNESLAQKPASTMQEVMKRAECYIKGEESNAEKRSRDSREKPSSRRSPERYNRGNSQRSGRYEDKGAGRYRQPWRSNERTYRAREEYTELNDSKVHVLDEILSSGLARLPPAPDSNARMGANENAWCHYHRAKGHDNEKCYRLKDLIEKLISSGHLRKFLERAAKGDLNKRSPPRSPRRSPPREGDEKEPKRIAVNTIAGGFAGGGESKAARKRYLRRIIQETNTVAHVSSSRVPKISFSPSDGEGVFPHDDDPLVIQVQILNCDVKRVLIDSGSSANIMYWEAFKAMQLAGEQLQPYNGTLVGFGGEHVEIHLAKFEQLNMDLFKKCLETVESCLSDAKINKSSVDDIVLVGGSSRIPKVQQLLQDFFKWKELCASINPDEAVAYGAAVQAALLCEGIGKSLSLVLRDVTPLSLGKSVRGDVMNIVIPINTSIPVKMTKEYVTIKDNQSRITVRVYKGERLKASENNLLSSFKFSIPPAPRGHIPIKVTFSIDLDGILNVSAREDTGGNKQDITITNEEGRLSTDDVERMIQEAEFFKAEDMKHMKKVKAMNALDDYLYDMKKVTKDESVTSMLTPLEKVKINSAMIKGKNLIEGKQNQDAFVFVDFLKELESTFESTLNKVNKSYFDEDSDSD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02473 649 Gene3D - 566 648 IPR029048 -
Tsu03g02473 649 SUPERFAMILY Actin-like ATPase domain 295 409 IPR043129 -
Tsu03g02473 649 MobiDBLite consensus disorder prediction 37 88 - -
Tsu03g02473 649 ProSitePatterns Heat shock hsp70 proteins family signature 3. 363 377 IPR018181 -
Tsu03g02473 649 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 570 IPR029047 -
Tsu03g02473 649 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 565 637 IPR029048 -
Tsu03g02473 649 MobiDBLite consensus disorder prediction 176 205 - -
Tsu03g02473 649 Gene3D Actin; Chain A, domain 4 324 341 - -
Tsu03g02473 649 Gene3D - 342 389 - -
Tsu03g02473 649 Pfam Hsp70 protein 324 630 IPR013126 GO:0005524|GO:0140662
Tsu03g02473 649 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 565 IPR029047 -
Tsu03g02473 649 PANTHER HEAT SHOCK PROTEIN 70KDA 325 638 IPR013126 GO:0005524|GO:0140662
Tsu03g02473 649 PANTHER HEAT SHOCK 70 KDA PROTEIN 325 638 - -
Tsu03g02473 649 Gene3D - 390 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02473 Tsu-Chr3 29194144 29204919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02473 323 628 Calmodulin-binding Proteins AT3G12580 56.818 8.10e-107 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02473 K03283 - gmx:102667578 348.591