Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02455 ATGGGTACACTATTTTGTGCTACCACAATTACTCTAATTTTATTGCTTAATTTCCACATCCCAGAAACAAAATCTCAACAAGACTATCTAGACAACCATCAACTAGATTGTGATGACTCCTTCAACTCTACATATGGTAATATCTGCAATAGCATGAAGTCCTGTCAATCTTACATCACCTTTAAATCAAGTCCTCCTTTGTACAACACTCCAGCCACCATAGCCTATCTTTTGAATTCCACAGTCCCTCTCATAACAAATGCCAACAATATCTCAGATGTAGACCCTATTCCCGTCGACACCATGATCACTGTCCCTGTGACCTGCTTTTGTTCTGGTCACTACTATCAGCATAATTCCTCATACATCTTGAAGAATGAGAATGAAAACTACTTCACTTTAGCCAATAACACCTATGAGGCACTCACAACGTGTCAGGCTCTTGATGCTCAGAATATATATGGACTTGACAGCCTCACTGTAGGGCTCAATTTGCATGTTCCACTCAGGTGTGCTTGTCCCACTTCCAAGCAAATGGAAAATGGATTCAAGTATCTTCTTACATATTTGGTCTCTGAAGGAGAATATCCTGAACTTATTGCTGAGCTTTTTGGGGTTGACACACAGAGCGTCTTGGATGCAAATAAGCTTCATGAGGATTCTGTTATCTACTACTTCACTCCATTGATGGTGCCTTTAAAAGACAAGCCACCTACCAAGATACAAAGGATACTACCGCCACCATCAGCACCACTGTCGAAATCTCCGGTGGAAAATCTAGCTAGGAATAAAGATTCAAGCTCTTCTAAGAAAAGGGTGATTGTTGGAAGCACTGTTGGAGCTGCTGCATTTTTGCTTTTTctcatcttttttttgttgttctttttctCTTGTCATCGGCATAAGAACAAAATTTCCTTGTCTTCTGTAGCCACCGATTCTGTAGCCACCAAAGTCACCACTGAGAAAGTCTCAAATACAGACACAAGTATAACCAACCCCTCCGTTTCTCTGTCTTCCGAAGGGCTTCGTTATGCAGCTGAGTCTTTGACGGTGTATAACTTTGAGGAGCTGCATAAAGCAACGAGCTTTTTCAGTGAAGCTAACAGAATAAATGGTTCTTCAGTTTACCGAGCAAGCTTGGAGGGTGATGTTGCTGCAGTTAAGGTTCTCAAAGGTGATGCCTCTGCAGAGATCAACATTCAAGGGAGAATCAGCCATGCCAACATAACAAGGCTCTCTGGGTTTTGCCTACACAAAGGAAGCACATATCTTGTCTACGAGTTTATTGAAAATGGTTCTCTTGATAATTGGATTCATTCTAACAATCGCTTAAATTTTGTGGCTCTGACTTGGAGGCAAAGAGTTCAGATTGTTCAGGATGTTGCTGATGCTTTGAATTACCTTCACAACTATGCCAACCCTTCACATATCCACAAGAATTTGATAAGTGGCAATGTTCTTTTGGATGGGAGTTTTAGAGGTAAACTTTGTAACTTTGGGTTAGCAAGAGTGgtgaatgatgatgattttggaggaGGGTTCCAATTGACAAGGCACGTTGTAGGCACCCATGGTTACATGCCACCTGAGTATATTGAGAACGGTTTGATTAGTCCAAAGATGGATGTTTTTGCTTTTGGGGTTGTGATATTGGAGCTTCTTTCAGGAAAAGAAGCAATTGTTGGGGATACGAATGGTGACGAGAAGCTGCTATCAGCTGCTGTGAGTGAAGTAGTTGAAGGCGATAATGTGAGGGAGAAACTTCATGCTTTTATGGATCCAACTTTGAGGGATGATTACCCATTGGATACGGCATATTCCATGGCAGAGATTGCCAAATGCTGTGTTGCCCGTGACCACAATTTGCGTCCAAACATTTCTGAAGTTTTGGTCATACTGTCTAAGATTCAATCTTCTTCACTagactga 1932 0.4037 MGTLFCATTITLILLLNFHIPETKSQQDYLDNHQLDCDDSFNSTYGNICNSMKSCQSYITFKSSPPLYNTPATIAYLLNSTVPLITNANNISDVDPIPVDTMITVPVTCFCSGHYYQHNSSYILKNENENYFTLANNTYEALTTCQALDAQNIYGLDSLTVGLNLHVPLRCACPTSKQMENGFKYLLTYLVSEGEYPELIAELFGVDTQSVLDANKLHEDSVIYYFTPLMVPLKDKPPTKIQRILPPPSAPLSKSPVENLARNKDSSSSKKRVIVGSTVGAAAFLLFLIFFLLFFFSCHRHKNKISLSSVATDSVATKVTTEKVSNTDTSITNPSVSLSSEGLRYAAESLTVYNFEELHKATSFFSEANRINGSSVYRASLEGDVAAVKVLKGDASAEINIQGRISHANITRLSGFCLHKGSTYLVYEFIENGSLDNWIHSNNRLNFVALTWRQRVQIVQDVADALNYLHNYANPSHIHKNLISGNVLLDGSFRGKLCNFGLARVVNDDDFGGGFQLTRHVVGTHGYMPPEYIENGLISPKMDVFAFGVVILELLSGKEAIVGDTNGDEKLLSAAVSEVVEGDNVREKLHAFMDPTLRDDYPLDTAYSMAEIAKCCVARDHNLRPNISEVLVILSKIQSSSLD 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02455 643 Pfam Protein kinase domain 393 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02455 643 Gene3D Transferase(Phosphotransferase) domain 1 430 642 - -
Tsu03g02455 643 SUPERFAMILY Protein kinase-like (PK-like) 339 631 IPR011009 -
Tsu03g02455 643 Gene3D Phosphorylase Kinase; domain 1 326 429 - -
Tsu03g02455 643 PANTHER PROTEIN LYK5 14 643 - -
Tsu03g02455 643 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 643 - -
Tsu03g02455 643 ProSiteProfiles Protein kinase domain profile. 362 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu03g02455 643 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Tsu03g02455 643 MobiDBLite consensus disorder prediction 245 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02455 Tsu-Chr3 28582456 28584529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02455 7 643 Receptor kinase-like Gene Family AT2G33580 47.859 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu03g02455 Pkinase 4.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02455 - - gmx:100818534 764.992