Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02432 ATGCATGATATGCTTGAAGAAATGGGTAAAACTATAGTTTTTCAAGAATCCCCTAATGATCCTGGTAGACGAAGCAGATTGTGGTCTCTAGAGGATATTGATAAAGGAACTGACAGTGTGCAAGGTATAGTTTTGAAATCATCGCCATCTATGATGTATGAAGCACATTGGGACCCTGAGGCATTCGCAAAGATGGGTAATCTTAGGTTACTCATTATATTATGTGATTTGCATCTTTCCCTTGGTCTAAAATGTCTTTCCAGCTCACTGAAAGTGCTTGTATGGTGGGGGTATCCACTGAATGCTCTACCACTTGGAGTTCAACTAGATGAGCTTGTACATTTACAAATGATCAATAGTAAAGTTAAACGGTTGTGGAATGGAAATGAGtcTTTTGGAAAGCTGAAAGTAATTGATTTGAGTAACTCCAAAGGTTTACGTCAAACTCTAAATATCTCTGGAATTCCAAATCTTGAAGAGTTGTATCTTAATGATTGTACAAAACTTATTGAAGTTTGCCAATCTATCAGACAACACAAAAAACTTATGGTAGTTAGCTTGATGGGATGTGTAGATCTGAAAACCTTTCCAAGTAAATTGGAAATGTGTTCCTTGAAAATGTTATTTCTATCTGATTACTCTAATGTTAAAAGACTTCCTGATTTTGGGGAAAATATGACAGGTGTCACGGCTCTCAACTTGATGAATTGCAAAAGTCTTCTATACCTTCCAAACAGCATTAGTAACCTGAAGTCTCTCAGAATTCTCAACATATCAGGATGTTCAAAAATTTGTACCCTTCCAAATGGTATAAATCGAAACAAGGCTTTGAAGGACATTGACTTGAGCAGAACCGCTATTAGAGAATTGGATCCATCCCTATTTCAGTTAGAAAATATCAAAAGATTATCATTCAGTGGATGTAGCAGGCCAACATCCAATTTCAGCTGGGAGTTTCGACTGCCTTTTAGCAAGAAGTTCAGGTTTTTCCCATCTCAAACAGGCTTAACATTGCCCCCTTTTAGACTAAATCTAAGTGGGAACAATTTTGTACGCCTTCCGACTCATTACATTGCTAATCTTACAAAGCTTCGTTATCTTGATTTGGAAGATTGTCCGCAGCTTCAATCTTTACCTATGCTTCCACCACATGTACGCTTGTACGTAATAGATTCAGATGCAAGGGAAGCTAATGCATTAGATCCACAAAAGATATGGAAGGTGTTTGAATCAAGTGAAAAAGAATTCTTACAGTCATCTGTATATCGAATGTTTGATTTCTTCGATCCTATGCACTTTGAAATCCCATCGAGATTTGATAATCAGAATTTTTTTCCCTTGAGCTCGTCGTATGTGTCAAAACTTGATTCAATTGCATCAGTAACAGTGGACATCCCTGATGATTGTCTTTCAAGTGACTGGTGGGGTGTGGCTGTATTTGTGGCCTTAGAAGCTGAAGTTCCACAGGATTCAGAGGAAGCTTCTAAAGGTTCAACAACATATAATGATCTTTACCTCATCGCAATGGTAGTGAGTTGTGATTTTATATACTTGCAGAGACGCCGAAGAGGCCACCGGAATTCCATGCATGAACCCTTCAGCAAGCACAGAAGGCCAGAGTTCAGGGAAAACAATTCGTTGCGTTTTGAAATGCGGGTGGCAGGGTGA 1668 0.3849 MHDMLEEMGKTIVFQESPNDPGRRSRLWSLEDIDKGTDSVQGIVLKSSPSMMYEAHWDPEAFAKMGNLRLLIILCDLHLSLGLKCLSSSLKVLVWWGYPLNALPLGVQLDELVHLQMINSKVKRLWNGNESFGKLKVIDLSNSKGLRQTLNISGIPNLEELYLNDCTKLIEVCQSIRQHKKLMVVSLMGCVDLKTFPSKLEMCSLKMLFLSDYSNVKRLPDFGENMTGVTALNLMNCKSLLYLPNSISNLKSLRILNISGCSKICTLPNGINRNKALKDIDLSRTAIRELDPSLFQLENIKRLSFSGCSRPTSNFSWEFRLPFSKKFRFFPSQTGLTLPPFRLNLSGNNFVRLPTHYIANLTKLRYLDLEDCPQLQSLPMLPPHVRLYVIDSDAREANALDPQKIWKVFESSEKEFLQSSVYRMFDFFDPMHFEIPSRFDNQNFFPLSSSYVSKLDSIASVTVDIPDDCLSSDWWGVAVFVALEAEVPQDSEEASKGSTTYNDLYLIAMVVSCDFIYLQRRRRGHRNSMHEPFSKHRRPEFRENNSLRFEMRVAG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02432 555 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 228 305 - -
Tsu03g02432 555 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 343 387 - -
Tsu03g02432 555 Gene3D Ribonuclease Inhibitor 56 202 IPR032675 -
Tsu03g02432 555 Gene3D Ribonuclease Inhibitor 203 275 IPR032675 -
Tsu03g02432 555 Pfam Leucine Rich Repeat 252 271 IPR001611 GO:0005515
Tsu03g02432 555 SUPERFAMILY L domain-like 2 389 - -
Tsu03g02432 555 Gene3D Ribonuclease Inhibitor 276 391 IPR032675 -
Tsu03g02432 555 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 219 - -
Tsu03g02432 555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 219 IPR044974 GO:0006952
Tsu03g02432 555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 228 305 IPR044974 GO:0006952
Tsu03g02432 555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 343 387 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02432 Tsu-Chr3 28171304 28173465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02432 1 305 WRKY Transcription Factor Family AT4G12020 35.260 4.93e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02432 - - mtr:MTR_3g080470 795.038